Voici les éléments 1 - 10 sur 91
  • Publication
    Accès libre
    Solar radiation explains litter degradation along alpine elevation gradients better than other climatic or edaphic parameters
    Organic matter (OM) decomposition has been shown to vary across ecosystems, suggesting that variation in local ecological conditions influences this process. A better understanding of the ecological factors driving OM decomposition rates will allow to better predict the effect of ecosystem changes on the carbon cycle. While temperature and humidity have been put forward as the main drivers of OM decomposition, the concomitant role of other ecosystem properties, such as soil physicochemical properties, and local microbial communities, remains to be investigated within large-scale ecological gradients. To address this gap, we measured the decomposition of a standardized OM source – green tea and rooibos tea – across 24 sites spread within a full factorial design including elevation and exposition, and across two distinct bioclimatic regions in the Swiss Alps. By analyzing OM decomposition via 19 climatic, edaphic or soil microbial activity-related variables, which strongly varied across sites, we identified solar radiation as the primary source of variation of both green and rooibos teabags decomposition rate. This study thus highlights that while most variables, such as temperature or humidity, as well as soil microbial activity, do impact decomposition process, in combination with the measured pedo-climatic niche, solar radiation, very likely by means of indirect effects, best captures variation in OM degradation. For instance, high solar radiation might favor photodegradation, in turn speeding up the decomposition activity of the local microbial communities. Future work should thus disentangle the synergistic effects of the unique local microbial community and solar radiation on OM decomposition across different habitats.
  • Publication
    Accès libre
    Soil properties and plant species can predict population size and potential introduction sites of the endangered orchid Cypripedium calceolus
    Background and Aims To counteract the ongoing worldwide biodiversity loss, conservation actions are required to re-establish populations of threatened species. Two key factors predominantly involved in finding the most suitable habitats for endangered plant species are the surrounding plant community composition and the physicochemical parameters of the soil rooting zone. However, such factors are likely to be context- and species-dependent, so it remains unclear to what extent they influence the performance of target species. Methods We studied large and small Swiss populations of the endangered orchid Cypripedium calceolus. We measured functional traits related to C. calceolus plant and population performance (clonal patch area, plant height, number, of leaf, stems, flowers and fruits), realized vegetation surveys, soil profile analyses, and tested for relationships between plant traits and the surrounding vegetation structure or soil physicochemical parameters. Results Large populations contained bigger patches with more stems and leaves, and produced more flower per individual than small populations. Neither vegetation alliances nor soil classes per se could predict C. calceolus functional traits and population size. However, functional traits explaining population performance and size were related to specific soil parameters (soil organic matter content, pH and phosphorus), in addition to a combination of presence-absence of plant indicator species, relating to ecotones between forests and clearings. Conclusion We show that even for species that can grow across a wide range of vegetation groups both indicator species and specific soil parameters can be used to assess the most favourable sites to implement (re)-introduction actions.
  • Publication
    Accès libre
    Detecting preservation and reintroduction sitesfor endangered plant species using a two-step modelingand field approach
    (2022-8-10) ;
    Broennimann, Olivier
    ;
    Storrer, Yannick
    ;
    ;
    Guisan, Antoine
    ;
    To withstand the surge of species loss worldwide, (re)introduction of endan-gered plant species has become an increasingly common technique in conser-vation biology. Successful (re)introduction plans, however, require identifyingsites that provide the optimal ecological conditions for the target species tothrive. In this study, we propose a two-step approach to identify appropriate(re)introduction sites. The first step involves modeling the niche and distribu-tion of the species with bioclimatic and topographical predictors, both at conti-nental and at national scales. The second step consists of refining thesebioclimatic predictions by analyzing stationary ecological parameters, such assoil conditions, and relating them to population-level fitness values. We dem-onstrate this methodology using Swiss populations of the lady's slipper orchid(Cypripedium calceolusL., Orchidaceae), for which conservation plans haveexisted for years but have generally been unfruitful. Our workflow identifiedsites for future (re)introductions based on the species requirements for mid-to-sunny light conditions and specific soil physico-chemical properties, such asbasic to neutral pH and low soil organic matter content. Our findings showthat by combining wide-scale bioclimatic modeling with fine scale field mea-surements it is possible to carefully identify the ecological requirements of atarget species for successful (re)introductions.
  • Publication
    Accès libre
    A standardized morpho-functional classification of the Planet’s humipedons
    (2022-7-5)
    Zanella, Augusto
    ;
    Ponge, J.-F
    ;
    Jabiol, B
    ;
    Van Delft, B
    ;
    De Waal, R
    ;
    Katzensteiner, Klaus
    ;
    Kolb, Eckart
    ;
    Bernier, Nicolas
    ;
    Mei, G.
    ;
    Blouin, M.
    ;
    Juilleret, Jérôme
    ;
    Pousse, N.
    ;
    Stanchi, S.
    ;
    Cesario, F.
    ;
    ; ;
    Chersich, Silvia
    It was time to take stock. We modified the humipedon classification key published in 2018 to make it easier and more practical. This morpho-functional taxonomy of the topsoil (humipedon) was only available in English; we also translated it into French and Italian. A standardized morphofunctional classification of humipedons (roughly the top 30–40 cm of soil: organic and organomineral surface horizons) would allow for a better understanding of the functioning of the soil ecosystem. This paper provides the founding principles of the classification of humipedon into humus systems and forms. With the recognition of a few diagnostic horizons, all humus systems can be determined. The humus forms that make up these humus systems are revealed by measuring the thicknesses of the diagnostic horizons. In the final part of the article, several figures represent the screenshots of a mobile phone or tablet application that allows for a fast recall of the diagnostic elements of the classification in the field. The article attempts to promote a standardized classification of humipedons for a global and shared management of soil at planet level.
  • Publication
    Accès libre
    Outils d’évaluation de la diversité et de l’activité des vers de terre : de la science participative à la recherche fondamentale
    (2022-2-1) ;
    Campiche, Sophie
    ;
    Gerber, Valentine
    ;
    Fietier, Amélie
    ;
    Scherrer, Luc
    ;
    Turberg, Pascal
    La compréhension et le suivi du fonctionnement des écosystèmes requièrent l’utilisation d’indicateurs biologiques simples et efficaces. Les vers de terre en font partie et leur étude permet d’appréhender l’écosystème à différents niveaux, depuis les sciences participatives impliquant le grand public à la recherche de pointe nécessitant des compétences scientifiques de haut niveau. Cet article présente une synthèse et une comparaison des techniques et outils actuels pour l’étude des communautés de vers de terre et leurs activités de bioturbation en fonction des objectifs et des besoins des potentiels utilisateurs. Depuis le simple comptage d’animaux au séquençage d’ADN en passant par les techniques de tomographie, l’étude des vers de terre offre un large éventail d’outils et de techniques qui permettent de mieux comprendre leur implication essentielle dans les services écosystémiques.
  • Publication
    Accès libre
    Earthworms, Plants, and Soils
    (New-York: John Wiley and Sons, Inc., 2021) ;
    Bullinger-Weber, G
    ;
    ;
    Turberg, Pascal
    ;
    ;
    Schlaepfer, Rodolphe
    ;
    Guenat, Claire
    The importance of engineers is increasingly recognized in soil science because of their implication in most important pedological processes. Furthermore, they contribute to ecological functions provided by soils in both natural and human‐modified environments. In this review, we focus on the role of two ecosystem engineers: (1) plants, their root system, and associated microorganisms and (2) earthworms. First, we explain why they are considered as major soil engineers, and which variables (texture, porosity, nutrient, and moisture dynamics) control their activities in space and time (hotspots and hot moments). Then, their roles in three processes of soil formation are reviewed, namely, rock and mineral weathering, soil structure (formation, stabilization, and disintegration), and bioturbation. For each of them, the involved mechanisms that occur at different spatial scales (from local to landscape) are presented. On one hand, tree uprooting plays a key role in rock weathering and soil profile bioturbation. In addition, living and dead roots also contribute to rock alteration and aggregation. On the other hand, earthworms are mainly involved in the formation of aggregates and burrows through their bioturbation activities and to a less extent in weathering processes. The long‐term effects of such mechanisms on soil heterogeneity, soil development, and pathways of pedogenesis are discussed. Finally, we show how these two main ecosystem engineers contribute to provisioning and regulating services. Through their physical activities of burrowing and soil aggregation, earthworms and plants increase plant productivity, water infiltration, and climate warming mitigation. They act as catalysts and provide, transform, and translocate organic matter and nutrients throughout the soil profile. Finally, due to inter‐ and intraspecific interactions and/or symbiosis with microorganisms (arbuscular fungi, bacteria), they enhance soil fertility, decrease parasitic action, and bioremediate some pollutants. Future research is, however, still needed for a better understanding of the relationships between adequate soil management, agricultural practices, and soil biota in a perspective of relevant maintenance and durability of ecological services.
  • Publication
    Accès libre
    Bioturbation by endogeic earthworms facilitates entomopathogenic nematode movement toward herbivore‑damaged maize roots
    Entomopathogenic nematodes (EPNs) have been extensively studied as potential biological control agents against root-feeding crop pests. Maize roots under rootworm attack have been shown to release volatile organic compounds, such as (E)-β-caryophyllene (Eβc) that guide EPNs toward the damaging larvae. As yet, it is unknown how belowground ecosystems engineers, such as earthworms, affect the biological control capacity of EPNs by altering the root Eβc-mediated tritrophic interactions. We here asked whether and how, the presence of endogeic earthworms affects the ability of EPNs to find root-feeding larvae of the beetle Diabrotica balteata. First, we performed a field mesocosm experiment with two diverse cropping systems, and revealed that the presence of earthworms increased the EPN infection potential of larvae near maize roots. Subsequently, using climatecontrolled, olfactometer-based bioassays, we confirmed that EPNs response to Eβc alone (released from dispensers) was two-fold higher in earthworm-worked soil than in earthworm-free soil. Together our results indicate that endogeic earthworms, through burrowing and casting activities, not only change soil properties in a way that improves soil fertility but may also enhance the biocontrol potential of EPNs against root feeding pests. For an ecologically-sound pest reduction in crop fields, we advocate agricultural practices that favour earthworm community structure and diversity.
  • Publication
    Accès libre
    Use of X-ray microcomputed tomography for characterizing earthworm-derived belowground soil aggregates
    (2020-3-21) ;
    Guenat, Claire
    ;
    Schlaepfer, Rodolphe
    ;
    Fischer, Franziska
    ;
    Luiset, Alexandre
    ;
    ;
    Turberg, Pascal
    Soil structure is closely linked to biological activities. However, identifying, describing and quantifying soil aggregates remain challenging. X-ray microcomputed tomography (X-ray μCT) provides a detailed view of the physicalstructure at a spatial resolution of a few microns. It could be a useful tool todiscriminate soil aggregates, their origin and their formation processes for a better comprehension of soil structure properties and genesis. Our study aims to (a) determine different X-ray μCT-based aggregate parameters for differentiating earthworm casts belowground (earthworm aggregates) from aggregates that are not formed by earthworms (non-earthworm aggregates), and (b) to evaluate if these parameters can also serve as specific “tomographic signatures” for the studied earthworm species. For this purpose, we set up a microcosm experiment under controlled conditions during 8 weeks, including three species of earthworms tested separately: the epigeic Lumbricus rubellus, the anecic Lumbricus terrestris and the endogeic Allolobophora chlorotica. Our results show that X-ray μCT analysis helps distinguish earthworm aggregates from non-earthworm ones using (a) the relative volume of the components within aggregates and (b) the volumetric mass of aggregates and their global volume. In particular, the volume ratio of mineral grains within the aggregates is significantly different according to earthworm species. So, X-ray μCT is a powerful and promising tool for studying the composition of earthworm casts and their formation. However, future research is needed to take into account the shapes and spatial distribution of the aggregates' components, in particular the different states of organic matter decomposition.
  • Publication
    Accès libre
    Pioneer plant Phalaris arundinacea and earthworms promote initial soil structure formation despite strong alluvial dynamics in a semi-controlled field experiment
    (2019-9-11) ; ;
    Turberg, Pascal
    ;
    Guenat, Claire
    ;
    Riaz, M.
    ;
    ;
    Luster, J.
    Soil structure formation is among the most important processes in river floodplains which are strongly influenced by alluvial dynamics. In the context of river restoration projects, a better understanding of soil structure formation in habitats adjacent to the river can help to prevent damages caused by riverbank erosion. Ecosystem engineers such as pioneer herbaceous plants and earthworms likely contribute to soil structure formation even despite less favourable environmental conditions. This study aims to assess the capacity of the herbaceous perennial and native species Phalaris arundinacea and earthworm communities to promote a stable soil structure in alluvial sediments, in particular fresh alluvial deposits, in the short term. Delimited plots were set-up in a restored floodplain adjacent to the Thur River in NE Switzerland and exposed to natural alluvial dynamics for 19 months. Four treatments were replicated in a randomised complete block design: (i) plots with Phalaris arundinacea as only vegetation, (ii) plots with all vegetation constantly removed, (iii) and (iv) the earthworm community reduced by mustard treatment, otherwise as (i) and (ii), respectively. Soil structure formation was analysed at the end of the experiment using different indicators: aggregate stability, field-saturated hydraulic conductivity and the porosity calculated from X-ray CT reconstructions of freeze cores. Phalaris arundinacea was capable of improving the porosity and aggregate stability of both alluvial sediments present at the beginning of the experiment but also of sediments freshly deposited during the observation period. The latter indicates a structuring effect within only one vegetation period. Earthworm abundance was as a whole very low, most likely due to the large proportion of sand. There was a small earthworm effect on soil structure formation, and only in combination with Phalaris.arundinacea. Our findings highlight the ability of Phalaris arundinacea in efficiently structuring sandy alluvial sediments in the short term even under strong alluvial dynamics. Phalaris arundinacea can therefore play a key role in the early stage of river restoration projects. Thus, facilitating the colonisation by such native pioneer herbaceous plants is a suitable step to improve the success of river restoration projects.
  • Publication
    Accès libre
    Composition and superposition of alluvial deposits drive macro-biological soil engineering and organic matter dynamics in floodplains
    (2019-8) ;
    Sebag, D.
    ;
    Turberg, P.
    ;
    Verrechia, E. P.
    ;
    Guenat, C.
    ;
    ;
    Adatte, T.
    ;
    Schlaepfer, R.
    ;
    Soil structure formation in alluvial soils is a fundamental process in near-natural floodplains. A stable soil structure is essential for many ecosystem services and helps to prevent river bank erosion. Plants and earthworms are successful soil engineering organisms that improve the soil structural stability through the incorporation of mineral and organic matter into soil aggregates. However, the heterogeneous succession of different textured mineral and buried organic matter layers could impede the development of a stable soil structure. Our study aims at improving the current understanding of soil structure formation and organic matter dynamics in near natural alluvial soils. We investigate the effects of soil engineering organisms, the composition, and the superimposition of different alluvial deposits on the structuration patterns, the aggregate stability, and organic matter dynamics in in vitro soil columns, representing sediment deposition processes in alluvial soils. Two successions of three different deposits, silt–buried litter–sand, and the inverse, were set up in mesocosms and allocated to four different treatments, i.e. plants, earthworms, plants+earthworms, and a control. X-ray computed tomography was used to identify structuration patterns generated by ecosystem engineers, i.e. plant root galleries and earthworm tunnels. Organic matter dynamics in macro-aggregates were investigated by Rock- Eval pyrolysis. Plant roots only extended in the top layers, whereas earthworms preferentially selected the buried litter and the silt layers. Soil structural stability measured via water stable aggregates (%WSA) increased in the presence of plants and in aggregates recovered from the buried litter layer. Organic matter dynamics were controlled by a complex interplay between the type of engineer, the composition (silt, sand, buried litter) and the succession of the deposits in the mesocosm. Our results indicate that the progress and efficiency of soil structure formation in alluvial soils strongly depends on the textural sequences of alluvial deposits.