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  4. A contribution to the phylogeny of agglutinating Arcellinida (Amoebozoa) based on SSU rRNA gene sequences
 
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A contribution to the phylogeny of agglutinating Arcellinida (Amoebozoa) based on SSU rRNA gene sequences

Auteur(s)
Gomaa, Fatma
Lahr, Daniel J. G
Todorov, Milcho
Li, Jingchun
Lara, Enrique 
Institut de biologie 
Date de parution
2017
In
European Journal of Protistology, Elsevier
Vol.
59
De la page
99
A la page
107
Mots-clés
  • Agglutinated shell
  • Classification
  • <i>Difflugia</i>
  • Morphology
  • Sphaerothecina
  • SSU rRNA gene sequences
  • Agglutinated shell

  • Classification

  • <i>Difflugia</i>

  • Morphology

  • Sphaerothecina

  • SSU rRNA gene sequenc...

Résumé
Arcellinid testate amoebae include a wide variety of amoeboid organisms whose test (shell) varies in shape, composition and size. A decade ago, we initiated molecular phylogenetic analyses based on SSU rRNA gene sequences and a taxonomic revision of Arcellinida. However, many lineages within Arcellinida still lack molecular data, and the phylogeny of this group is largely incomplete. In this study, we obtained SSU rRNA gene sequences from seven taxa, of which six have agglutinated shell (<i>Difflugia oblonga</i>, <i>D. labiosa</i>, <i>D. gramen</i>, <i>Mediolus corona</i>, <i>Netzelia wailesi</i>, and <i>N. tuberculata</i>), and one has an entirely proteinaceous shell (<i>Arcella intermedia</i>). All species but <i>Difflugia oblonga</i> branched within the recently erected suborder Sphaerothecina, confirming the synapomorphic value of an oviform or discoid shell. Thus, we propose that species with an oviform or discoid shell currently classified within genus <i>Difflugia</i> must be transferred to other genera, thus continuing the process of taxonomic revision of genus <i>Difflugia</i>, the largest Arcellinida genus. We therefore transferred the current and the previously sequenced oviform <i>Difflugia</i> spp. to <i>Netzelia</i> spp., based on the shared globular/oviform shell shape and their monophyly. Another species, <i>D. labiosa</i>, formed an independent lineage that branched as a sister clade to <i>Arcella</i> spp.; based on the shell morphology and their phylogenetic position, we considered <i>D. labiosa</i> as incertae sedis.
Identifiants
https://libra.unine.ch/handle/123456789/4805
_
10.1016/j.ejop.2017.03.005
Type de publication
journal article
Dossier(s) à télécharger
 main article: Gomaa_F.-Contribution_to_the_phylogeny-20170428.pdf (875.28 KB)
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