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  • Publication
    Accès libre
    SSU rRNA reveals a sequential increase in shell complexity among the euglyphid testate amoebae (Rhizaria : Euglyphida)
    (2007) ;
    Heger, Thierry J
    ;
    ;
    Meisterfeld, Ralf
    ;
    Ekelund, Flemming
    The existing data on the molecular phylogeny of filose testate amoebae from order Euglyphida has revealed contradictions between traditional morphological classification and SSU rRNA phylogeny and, moreover, the position of several important genera remained unknown. We therefore carried out a study aiming to fill several important gaps and better understand the relationships among the main euglyphid testate amoebae and the evolutionary steps that led to the present diversity at a higher level. We obtained new SSU rRNA sequences from five genera and seven species. This new phylogeny obtained shows that (1) the clade formed by species of genera Assulina and Placocista branches unambiguously at the base of the subclade of Euglyphida comprising all members of the family Trinematidae and genus Euglypha, (2) family Trinematidae (Trachelocorythion, Trinema, and Corythion) branches as a sister group to genus Euglypha, (3) three newly sequenced Euglypha species (E. cf. ciliata, E. penardi, and E. compressa) form a new clade within the genus. Since our results show that Assulina and Placocista do not belong to the Euglyphidae (unless the Trinematidae are also included in this family), we propose the creation of a new family named Assulinidae. Consequently, we give a family status to the genera Euglypha and (tentatively) Scutiglypha, which become the new family Euglyphidae. The evolutionary pattern suggested by SSU rRNA phylogeny shows a clear tendency towards increasing morphological complexity of the shell characterised by changes in the symmetry (migration of the aperture to a ventral position and/or compression of the shell) and the appearance of specialised scales at the aperture (in families Trinematidae and Euglyphidae). (C) 2007 Elsevier GmbH. All rights reserved.
  • Publication
    Accès libre
    Changes in testate amoebae (Protists) communities in a small raised bog. A 40-year study
    (2005)
    Kishaba, Keiko
    ;
    We analyzed the testate amoebae communities from two sets of moss samples taken forty years apart ( 1961 and 2001) in the same locations of a peat bog of the Swiss Jura Mountains. Peat Cutting and lateral drainage of Le Cachot bog have caused a clear increase in tree cover, especially near the edges. Changes affecting herbaceous plants, mosses. or soil organisms can be subtle, and may easily be overlooked. We hypothesized that we would see changes in the dominant Sphagnum species and the structure of testate amoebae communities living in the mosses. More specifically, we hypothesized that the frequency of bryophyte and testate amoebae species indicative for dry conditions Would increase and that the frequency of species indicative for wet conditions would decrease. The mean testate amoebae species richness per sample decreased from 11.9 to 9.6, but the overall species richness was identical (33 species) in both years. Three species increased significantly in mean relative abundance: Nebela tincta s.l. (+97 %), Bullinularia indica (+ 810 %), and Cyclopyxis eurystoma (+ 100 %; absent in 1961), while two species decreased significantly: Assulina muscorum (- 63 %) and Euglypha compressa (-93 %). The testate amoebae communities clearly differed among microhabitat types (hummocks, lawns, hollows), but no overall significant change in the community was detectable between the two sampling dates (Mantel test). These results could signify that changes at the microscopic level had already taken place by 1961 and no further overall significant changes in micro-enviromental conditions took place during the 40-year period of this Study. This Would agree with the faster response time usually attributed to microorganisms and would also imply that the bushes and trees may be poor predictors of the response of microorganisms if they are themselves in a non-equilibrium stage. Other possible causes for the lack of overall differences are discussed.
  • Publication
    Accès libre
    Horizontal distribution patterns of testate amoebae (Protozoa) in a Sphagnum magellanicum carpet
    (2000-5-2) ;
    Borcard, D.
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    Buttler, Alexandre
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    Grosvernier, Philippe
    ;
    Gilbert, Daniel
    ;
    The distribution of soil microorganisms is generally believed to be patchy and to reflect habitat heterogeneity. Despite this general rule, the amount of existing data oil species distribution patterns is scarce. Testate amoebae (Protozoa; Rhizopoda) are an important component of soil microbial communities and are increasingly used in ecological and paleoecological studies of Sphagnum-dominated peatlands, but data on the spatial structure of communities are completely lacking. This is an important aspect since quantitative models used for paleoecological reconstruction and monitoring are based on species assemblages. We explored the distribution patterns of testate amoebae distribution in a macroscopically homogeneous Sphagnum carpet, down to a scale of several centimeters. Distributions maps of the species and spatially constrained sample groups were produced. Multivariate and individual spatial autocorrelations were calculated. The importance of spatial structure was quantified by canonical correspondence analysis. Our ultimate goal is to find the finest resolution of environmental monitoring using testate amoebae. The distribution patterns differed among species, resulting in a complex spatial structure of the species assemblage in a whole. Spatial structure accounted for 36% of the total variation of species abundance in a canonical correspondence analysis constrained by spatial variables. This structure was partly correlated to altitude (microtopography) at a very fine scale. These results confirmed the existence of significant broad-and fine-scale spatial structures within restate amoebae communities that could in parr be interpreted as effects of ecological gradients. This shows that, on a surface area of 0.25 m(2), ecological conditions which look uniform from a macroscopic point of view are not perceived as such by Sphagnum-inhabiting organisms. Therefore, restate amoebae could prove very useful to monitor fine-scale ecological processes or disturbances. Studies of the species' spatial distribution patterns in combination with autoecological studies are needed and should be included in the toolbox of biomonitoring itself.