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  • Publication
    Métadonnées seulement
    The curse of taxonomic uncertainty in biogeographical studies of free-living terrestrial protists: a case study of testate amoebae from Amsterdam Island
    (2009)
    Heger, Thierry J
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    Ledeganck, Pieter
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    Vincke, Sofie
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    Van de Vijver, Bart
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    Beyens, Louis
    Aim A current debate in microbial biogeography contrasts two views concerning the distribution of free-living microorganisms. The first view assumes a ubiquitous distribution, while the second assumes that at least some species have limited geographical distributions. We tested for limited geographical distributions by identifying testate amoebae morphospecies from an extremely remote oceanic island where the potential for endemism is high. Location Amsterdam Island, Indian Ocean. Methods Sixty moss and water samples collected from the top of the volcano to the lowland were investigated for their testate amoeba content. Due to taxonomic uncertainties among the Argynnia (Nebela) dentistoma species complex (including A. antarctica), we also performed light and scanning electron microscopy investigations on the shell ultrastructure and biometric analyses on several specimens of this taxon. Results We identified a total of 43 testate amoeba taxa belonging to 15 genera. Only four testate amoeba taxa had previously been recorded on this island. Testate amoeba communities of Amsterdam Island are dominated by cosmopolitan ubiquitous euglyphid taxa such as Trinema lineare, Assulina muscorum and Corythion dubium. The length and width ranges for Argynnia dentistoma on Amsterdam Island overlap with other records of this species and of A. antarctica, suggesting that A. antarctica is not a distinct taxon. Main conclusions Although Amsterdam Island is among the most remote islands in the world, an extensive inventory of testate amoeba morphospecies provided no clear evidence for endemism. On the one hand, our detailed morphometric analysis of the A. dentistoma complex revealed that A. antarctica, a morphospecies previously suggested to display endemism, cannot be confidently distinguished from the cosmopolitan morphospecies A. dentistoma. On the other hand, five morphotaxa could not be identified with certainty and might represent new species, potentially with limited distribution. These examples illustrate how taxonomic uncertainties undermine biogeographical studies of testate amoebae. In order to allow better interpretation of morphology-based testate amoeba distribution data, an assessment of genetic diversity among and within morphotaxa in relation to geographical distance for some common testate amoebae should be given high priority.
  • Publication
    Métadonnées seulement
    The testate lobose amoebae (order Arcellinida Kent, 1880) finally find their home within Amoebozoa
    (2005)
    Nikolaev, Sergey I
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    Petrov, Nikolay B
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    Berney, Cédric
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    Fahrni, José
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    Pawlowski, Jan
    Testate lobose amoebae (order Arcellinida Kent, 1880) are common in all aquatic and terrestrial habitats, yet they are one of the last higher taxa of unicellular eukaryotes that has not found its place in the tree of life. The morphological approach did not allow to ascertain the evolutionary origin of the group or to prove its monophyly. To solve these challenging problems, we analyzed partial small-subunit ribosomal RNA (SSU rRNA) genes of seven testate lobose amoebae from two out of the three suborders and seven out of the 13 families belonging to the Arcellinida. Our data support the monophyly of the order and clearly establish its position among Amoebozoa, as a sister-group to the clade comprising families Amoebidae and Hartmannellidae. Complete SSU rRNA gene sequences from two species and a partial actin sequence from one species confirm this position. Our phylogenetic analyses including representatives of all sequenced lineages of lobose amoebae suggest that a rigid test appeared only once during the evolution of the Amoebozoa, and allow reinterpretation of some morphological characters used in the systematics of Arcellinida. (c) 2005 Published by Elsevier GmbH.
  • Publication
    Métadonnées seulement
    Relationships among testate amoebae (Protozoa), vegetation and water chemistry in five Sphagnum-dominated peatlands in Europe
    (2000) ;
    Buttler, Alexandre
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    Grosvernier, Philippe
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    Rydin, Hakan
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    Albinsson, Christer
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    Greenup, Alisson
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    Heijmans, Monique
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    Hoosbeek, Marcel
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    Saarinen, Timo
    To study the relationships between groups of organisms and the degree to which these relationships are consistent across major climatic gradients, we analysed the testate amoeba (Protozoa) communities, vegetation and water chemistry of one peatland in five countries: Switzerland, The Netherlands, Great Britain, Sweden and Finland, as part of the BERI (Bog Ecosystem Research Initiative) project. The relationships between the different data sets and subsets were investigated by means of detrended correspondence analysis, canonical correspondence analysis and Mantel permutation tests. The comparison of data on vegetation and testate amoebae showed that inter-site differences are more pronounced for the vegetation than for the testate amoebae species assemblage. Testate amoebae are a useful tool in multi-site studies and in environmental monitoring of peatlands because: (1) the number of species in Sphagnum-dominated peatlands is much higher than for mosses or vascular plants; (2) most peatland species are cosmopolitan in their distributions and therefore less affected than plants by biogeographical distribution patterns, thus differences in testate amoeba assemblages can be interpreted primarily in terms of ecology; (3) they are closely related to the ecological characteristics of the exact spot where they live, therefore they can be used to analyse small-scale gradients that play a major role in the functioning of peatland ecosystems. This study revealed the existence of small-scale vertical gradients within the vegetation and life-form niche separation in response to water chemistry. The deep-rooted plants such as Carex spp. and Eriophorum spp. are related to the chemistry of water sampled at or near the ground water table, whereas the mosses are not. Testate amoebae wereshown to be ecologically more closely related to the chemistry of water sampled at or near the water table level and to the mosses than to the deep-rooted plants.
  • Publication
    Métadonnées seulement
    Ecology of testate amoebae (Protozoa : Rhizopoda) in Sphagnum peatlands in the Jura mountains, Switzerland and France
    (1999-5-2) ;
    Buttler, Alexandre
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    Warner, Barry
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    Testate amoebae (Protozoa) living in Sphagnum peatlands are important environmental and paleoecological indicators. The distribution of these animals is closely related to soil moisture variables. This study examines the ecology of sphagnicolous testate amoebae near the southern limit of bogs in Europe. A total of 64 samples were collected for analysis of testate amoebae from six peatlands in the Jura region of Switzerland and France. Eleven site-specific ecological variables, six of which were soil-moisture related variables, were measured at each site. The data were subjected to weighted averaging, jack-knifing, cluster analysis, canonical correspondence analysis, and the indicator value method to model relationships between testate amoebae distributions and environmental variables. Testate amoebae abundance showed a direct relationship with pear pH and depth to water table. Strong relationships were with sites that had a water table less than 41 cm deep. In drier sites with water table depth greater than 41 cm, other factors such as soil porosity and water holding capacity were more important compared to the wetter sites. Though there was a strong relationship between restate amoebae faunas and soil moisture content and porosity, these two variables could not be confidently predicted. Testate amoebae in peatlands in this region appear to be sensitive to peat pH and water tables. Further work is needed to explore relationships between restate amoebae, soil moisture, and porosity.