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  • Publication
    Métadonnées seulement
    The performance of single- and multi-proxy transfer functions (testate amoebae, bryophytes, vascular plants) for reconstructing mire surface wetness and pH
    (2013) ;
    Payne, Richard J.
    ;
    van der Knaap, Willem O.
    ;
    Lamentowicz, Lukasz
    ;
    Gabka, Maciej
    ;
    Lamentowicz, Mariusz
    Peatlands are widely exploited archives of paleoenvironmental change. We developed and compared multiple transfer functions to infer peatland depth to the water table (DWT) and pH based on testate amoeba (percentages, or presence/absence), bryophyte presence/absence, and vascular plant presence/absence data from sub-alpine peatlands in the SE Swiss Alps in order to 1) compare the performance of single-proxy vs. multi-proxy models and 2) assess the performance of presence/absence models. Bootstrapping cross-validation showing the best performing single-proxy transfer functions for both DWT and pH were those based on bryophytes. The best performing transfer functions overall for DWF were those based on combined testate amoebae percentages, bryophytes and vascular plants; and, for pH, those based on testate amoebae and bryophytes. The comparison of DWT and pH inferred from testate amoeba percentages and presence/absence data showed similar general patterns but differences in the magnitude and timing of some shifts. These results show new directions for paleoenvironmental research, 1) suggesting that it is possible to build good-performing transfer functions using presence/absence data, although with some loss of accuracy, and 2) supporting the idea that multi-proxy inference models may improve paleoecological reconstruction. The performance of multi-proxy and single-proxy transfer functions should be further compared in paleoecological data. (C) 2012 University of Washington. Published by Elsevier Inc. All rights reserved.
  • Publication
    Métadonnées seulement
    Testing peatland testate amoeba transfer functions: Appropriate methods for clustered training-sets
    (2012)
    Payne, Richard J.
    ;
    Telford, Richard J.
    ;
    Blackford, Jeffrey J.
    ;
    Blundell, Antony
    ;
    Booth, Robert K.
    ;
    Charman, Dan J.
    ;
    Lamentowicz, Lukasz
    ;
    Lamentowicz, Mariusz
    ;
    ;
    Potts, Genevieve
    ;
    Swindles, Graeme T.
    ;
    Warner, Barry G.
    ;
    Woodland, Wendy
    Transfer functions are widely used in palaeoecology to infer past environmental conditions from fossil remains of many groups of organisms. In contrast to traditional training-set design with one observation per site, some training-sets, including those for peatland testate amoeba-hydrology transfer functions, have a clustered structure with many observations from each site. Here we show that this clustered design causes standard performance statistics to be overly optimistic. Model performance when applied to independent data sets is considerably weaker than suggested by statistical cross-validation. We discuss the reasons for these problems and describe leave-one-site-out cross-validation and the cluster bootstrap as appropriate methods for clustered training-sets. Using these methods we show that the performance of most testate amoeba-hydrology transfer functions is worse than previously assumed and reconstructions are more uncertain.
  • Publication
    Métadonnées seulement
    A near-annual palaeohydrological study based on testate amoebae from a sub-alpine mire: surface wetness and the role of climate during the instrumental period
    (2010)
    Lamentowicz, Mariusz
    ;
    Van der Knaap, Willem
    ;
    Lamentowicz, Lukasz
    ;
    Van Leeuwen, Jacqueline F. N.
    ;
    ;
    Goslar, Tomasz
    ;
    Kamenik, Christian
    We present the first testate amoeba-based palaeohydrological reconstruction from the Swiss Alps, and the first depth to the water table (DWT) calibration dataset for this region. Compared to existing models, Our new calibration dataset performs well (RMSEP=4.88), despite the length of the water table gradient covered (53 cm). The present-day topography and vegetation of the study mire Mauntschas suggest that it is partly ombrotrophic (large Sphagnum fuscum hummocks, one of which was the coring site) but mostly under the minerotrophic influence of springs in the mire and runoff from the surrounding area. Ombrotrophic Sphagnum fuscum hummocks developed at the sampling site only during the last 50 years, when testate amoebae indicate a shift towards dry and/or acid conditions. Prior to AD 1950 the water table was much higher, suggesting that the influence of the mineral-rich water prevented the development of ombrotrophic hummocks. The reconstructed DWT correlated with Pinus cembra pollen accumulation rates, suggesting that testate amoebae living on the mire and P. cembra growing Outside of it partly respond to the salve factor(s). Finally, temperature trends from the nearby meteorological station paralleled trends in reconstructed DWT. However, contrary to other studies made on raised bogs of northwestern Europe, the highest correlation was observed for winter temperature, despite the fact that testate amoebae would more logically respond to moisture conditions during the growing season. The observed correlation with winter temperature might reflect a control of winter severity on surface moisture during at least the first part of the growing season, through snow melt and soil frost phenomena influencing run-Off. More ecohydrological work on subalpine mires is needed to understand the relationships between climate, testate amoebae and peatland development. Copyright (C) 2009 John Wiley & Sons, Ltd.
  • Publication
    Métadonnées seulement
    Contrasting Species-Environment Relationships in Communities of Testate Amoebae, Bryophytes and Vascular Plants Along the Fen-Bog Gradient
    (2010)
    Lamentowicz, Mariusz
    ;
    Lamentowicz, Lukasz
    ;
    van der Knaap, Willem O.
    ;
    Gabka, Maciej
    ;
    We studied the vegetation, testate amoebae and abiotic variables (depth of the water table, pH, electrical conductivity, Ca and Mg concentrations of water extracted from mosses) along the bog to extremely rich fen gradient in sub-alpine peatlands of the Upper Engadine (Swiss Alps). Testate amoeba diversity was correlated to that of mosses but not of vascular plants. Diversity peaked in rich fen for testate amoebae and in extremely rich fen for mosses, while for testate amoebae and mosses it was lowest in bog but for vascular plants in extremely rich fen. Multiple factor and redundancy analyses (RDA) revealed a stronger correlation of testate amoebae than of vegetation to water table and hydrochemical variables and relatively strong correlation between testate amoeba and moss community data. In RDA, hydrochemical variables explained a higher proportion of the testate amoeba and moss data than water table depth. Abiotic variables explained a higher percentage of the species data for testate amoebae (30.3% or 19.5% for binary data) than for mosses (13.4%) and vascular plants (10%). These results show that (1) vascular plant, moss and testate amoeba communities respond differently to ecological gradients in peatlands and (2) testate amoebae are more strongly related than vascular plants to the abiotic factors at the mire surface. These differences are related to vertical trophic gradients and associated niche differentiation.
  • Publication
    Accès libre
    Contrasting Species—Environment Relationships in Communities of Testate Amoebae, Bryophytes and Vascular Plants Along the Fen–Bog Gradient
    (2010)
    Lamentowicz, Mariucz
    ;
    Lamentowicz, Lukasz
    ;
    van der Knaap, W.O.
    ;
    GÄ…bka, Maciej
    ;
    We studied the vegetation, testate amoebae and abiotic variables (depth of the water table, pH, electrical conductivity, Ca and Mg concentrations of water extracted from mosses) along the bog to extremely rich fen gradient in sub-alpine peatlands of the Upper Engadine (Swiss Alps). Testate amoeba diversity was correlated to that of mosses but not of vascular plants. Diversity peaked in rich fen for testate amoebae and in extremely rich fen for mosses, while for testate amoebae and mosses it was lowest in bog but for vascular plants in extremely rich fen. Multiple factor and redundancy analyses (RDA) revealed a stronger correlation of testate amoebae than of vegetation to water table and hydrochemical variables and relatively strong correlation between testate amoeba and moss community data. In RDA, hydrochemical variables explained a higher proportion of the testate amoeba and moss data than water table depth. Abiotic variables explained a higher percentage of the species data for testate amoebae (30.3% or 19.5% for binary data) than for mosses (13.4%) and vascular plants (10%). These results show that (1) vascular plant, moss and testate amoeba communities respond differently to ecological gradients in peatlands and (2) testate amoebae are more strongly related than vascular plants to the abiotic factors at the mire surface. These differences are related to vertical trophic gradients and associated niche differentiation.
  • Publication
    Accès libre
    A near-annual palaeohydrological study based on testate amoebae from a sub-alpine mire: surface wetness and the role of climate during the instrumental period
    (2009)
    Lamentowicz, Mariucz
    ;
    van Der Knaap, Willem
    ;
    Lamentowicz, Lukasz
    ;
    van Leeuwen, Jacqueline F. N.
    ;
    ;
    Tomasz, Goslar
    ;
    Kamenik, Christian
    We present the first testate amoeba-based palaeohydrological reconstruction from the Swiss Alps, and the first depth to the water table (DWT) calibration dataset for this region. Compared to existing models, our new calibration dataset performs well (RMSEP = 4.88), despite the length of the water table gradient covered (53 cm). The present-day topography and vegetation of the study mire Mauntschas suggest that it is partly ombrotrophic (large Sphagnum fuscum hummocks, one of which was the coring site) but mostly under the minerotrophic influence of springs in the mire and runoff from the surrounding area. Ombrotrophic Sphagnum fuscum hummocks developed at the sampling site only during the last 50 years, when testate amoebae indicate a shift towards dry and/or acid conditions. Prior to AD 1950 the water table was much higher, suggesting that the influence of the mineral-rich water prevented the development of ombrotrophic hummocks. The reconstructed DWT correlated with Pinus cembra pollen accumulation rates, suggesting that testate amoebae living on the mire and P. cembra growing outside of it partly respond to the same factor(s). Finally, temperature trends from the nearby meteorological station paralleled trends in reconstructed DWT. However, contrary to other studies made on raised bogs of northwestern Europe, the highest correlation was observed for winter temperature, despite the fact that testate amoebae would more logically respond to moisture conditions during the growing season. The observed correlation with winter temperature might reflect a control of winter severity on surface moisture during at least the first part of the growing season, through snow melt and soil frost phenomena influencing run-off. More ecohydrological work on sub-alpine mires is needed to understand the relationships between climate, testate amoebae and peatland development.