Aebi, Alexandre

2020-1-5, Hernandez, Julie, Maisonnasse, Albin, Cousin, Marianne, Beri, Constance, Le Quintrec, Corentin, Bouetard, Anthony, Castex, David, Decante, Damien, Servel, Elois, Buchwalder, Gerald, Brunet, Francois, Feschet-Destrella, Estelle, de Bellescize, Kiliana, Kairo, Guillaume, Frontero, Léa, Pédehontaa-Hiaa, Miren, Buisson, Robin, Pouderoux, Theo, Aebi, Alexandre, Kretzschmar, André

Methods for the evaluation and comparison of the structure of numerous honeybee colonies are needed for the development of applied and fundamental field research, as well as to evaluate how the structure and activity of honeybee colonies evolve over time. ColEval complements existing methods, as it uses an online reference image bank for (human) learning and training purposes. ColEval is based on the evaluation of the surface area percentage occupied by different components of a honeybee colony: adult worker bees, open and capped brood, honey, nectar, and pollen. This method is an essential tool for the description of the evolution in the size of honeybee colonies. The procedure makes allowances for tendencies between different observers and uses them to calculate accurate measurements of honeybee colony evaluation. ColEval thus allows for a posteriori comparison of under- or over-evaluation made by different observers working on the same project; it is thus possible to eliminate observer bias in the measurements and to conduct large surveys.

2018-12-7, Sandau, Nadine, Naisbit, Russel E, Fabian, Yvonne, Bruggisser, Odile T, Kehrli, Patrick, Aebi, Alexandre, Rohr, Rudolf, Bersier, Louis-Felix

Studies on biodiversity–ecosystem functioning (BEF) in highly controlled experiments often yield results incompatible with observations from natural systems: experimental results often reveal positive relationships between diversity and productivity, while for natural systems, zero or even negative relationships have been reported. The discrepancy may arise due to a limited or closed local species pool in experiments, while natural systems in meta-community contexts experience dynamic processes, i.e., colonization and extinctions. In our study, we analysed plant community properties and above-ground biomass within a semi-natural (i.e., not weeded) experiment in an agricultural landscape. Eleven replicates with four different diversity levels were created from a species pool of 20 wildflower species. We found an overall significant negative relationship between total diversity and productivity. This relationship likely resulted from invasion resistance: in plots sown with low species numbers, we observed colonization by low-performing species; colonization increased species richness but did not contribute substantially to productivity. Interestingly, when analysing the biomass of the sown and the colonizer species separately, we observed in both cases positive BEF relationships, while this relationship was negative for the whole system. A structural equation modelling approach revealed that higher biomass of the sown species was linked to higher species richness, while the positive BEF relationship of the colonizers was indirect and constrained by the sown species biomass. Our results suggest that, in semi-natural conditions common in extensive agroecosystems, the negative BEF relationship results from the interplay between local dominant species and colonization from the regional species pool by subordinate species.

2017-11-9, Pisa, Lennard, Goulson, Dave, Yang, En-Cheng, Gibbons, David, Sánchez-Bayo, Francisco, Mitchell, Edward, Aebi, Alexandre, van der Sluijs, Jeroen, MacQuarrie, Chris JK, Giorio, Chiara, Yim Long, Elizabeth, McField, Melanie, Bijleveld van Lexmond, Maarten, Bonmatin, Jean-Marc

New information on the lethal and sublethal effects of neonicotinoids and fipronil on organisms is presented in this review, complementing the previous Worldwide Integrated Assessment (WIA) in 2015. The high toxicity of these systemic insecticides to invertebrates has been confirmed and expanded to include more species and compounds. Most of the recent research has focused on bees and the sublethal and ecological impacts these insecticides have on pollinators. Toxic effects on other invertebrate taxa also covered predatory and parasitoid natural enemies and aquatic arthropods. Little new information has been gathered on soil organisms. The impact on marine and coastal ecosystems is still largely uncharted. The chronic lethality of neonicotinoids to insects and crustaceans, and the strengthened evidence that these chemicals also impair the immune system and reproduction, highlights the dangers of this particular insecticidal class (neonicotinoids and fipronil), with the potential to greatly decrease populations of arthropods in both terrestrial and aquatic environments. Sublethal effects on fish, reptiles, frogs, birds, and mammals are also reported, showing a better understanding of the mechanisms of toxicity of these insecticides in vertebrates and their deleterious impacts on growth, reproduction, and neurobehaviour of most of the species tested. This review concludes with a summary of impacts on the ecosystem services and functioning, particularly on pollination, soil biota, and aquatic invertebrate communities, thus reinforcing the previous WIA conclusions (van der Sluijs et al. 2015).

2016-9-27, Sandau, Nadine, Fabian, Yvonne, Bruggisser, Odile T, Rohr, Rudolf P, Naisbit, Russel E, Kehrli, Patrick, Aebi, Alexandre, Bersier, Louis-Felix

How species diversity influences ecosystem functioning has been the subject of many experiments and remains a key question for ecology and conservation biology. However, the fact that diversity cannot be manipulated without affecting species composition makes this quest methodologically challenging. Here, we evaluate the relative importance of diversity and of composition on biomass production, by using partial Mantel tests for one variable while controlling for the other. We analyse two datasets, from the Jena (2002–2008) and the Grandcour (2008–2009) Experiments. In both experiments, plots were sown with different numbers of species to unravel mechanisms underlying the relationship between biodiversity and ecosystem functioning (BEF). Contrary to Jena, plots were neither mowed nor weeded in Grandcour, allowing external species to establish. Based on the diversity–ecosystem functioning and competition theories, we tested two predictions: 1) the contribution of composition should increase with time; 2) the contribution of composition should be more important in non‐weeded than in controlled systems. We found support for the second hypothesis, but not for the first. On the contrary, the contribution of species richness became markedly more important few years after the start of the Jena Experiment. This result can be interpreted as suggesting that species complementarity, rather than intraspecific competition, is the driving force in this system. Finally, we explored to what extent the estimated relative importance of both factors varied when measured on different spatial scales of the experiment (in this case, increasing the number of plots included in the analyses). We found a strong effect of scale, suggesting that comparisons between studies, and more generally the extrapolation of results from experiments to natural situations, should be made with caution.

2019-11-1, Sutter, Louis, Aebi, Alexandre, Buchwalder, Gerald, Caballé, Pierre, Dietemann, Vincent, Girardin, Olivier, Hernandez, Julie, Jacopin-Bucher, Eloise, Mayor, Pascal, Ménétrier, Vanessa, Praz, Christophe, Varennes, Yann-David

2018-11-1, Aebi, Alexandre, Moinet, Gabriel, Mitchell, Edward

Le déclin de la biodiversité et l’alté- ration des services écosystémiques mettent en péril la production à long terme de denrées alimentaires et de fourrage. Il est nécessaire de se tourner vers des systèmes de production agricole basés sur l’utili- sation de la diversité biologique et sur des écosystèmes en bon état de fonctionnement. L’agroécologie pro- pose de nouvelles solutions en la matière

2017-9-6, Mitchell, Edward, Mulhauser, Blaise, Mulot, Matthieu, Mutabazi, Aline, Glauser, Gaétan, Aebi, Alexandre

2019-2-5, Kammoun, Souad, Mulhauser, Blaise, Aebi, Alexandre, Mitchell, Edward, Glauser, Gaetan

Neonicotinoids and the closely related insecticide classes sulfoximines and butenolides have recently attracted growing concerns regarding their potential negative effects on non-target organisms, including pollinators such as bees. Indeed, it is becoming increasingly clear that these effects may occur at much lower levels than those considered to be safe for humans. To properly assess the ecological and environmental risks posed by neonicotinoids, appropriate sampling and analytical procedures are needed. Here, we used honey as reliable environmental sampler and developed an unprecedentedly sensitive method based on QuEChERS and UHPLC-MS/MS for the simultaneous determination of the nine neonicotinoids and related molecules currently present on the market (acetamiprid, clothianidin, dinotefuran, flupyradifurone, imidacloprid, nitenpyram, sulfoxaflor, thiacloprid and thiamethoxam). The method was validated and provided excellent levels of precision and accuracy over a wide concentration range of 3–4 orders of magnitude. Lowest limits of quantification (LLOQs) as low as 2–20 pg/g of honey depending on the analytes were reached. The method was then applied to the analysis of 36 honey samples from various regions of the World which had already been analysed for the five most common neonicotinoids (acetamiprid, clothianidin, imidacloprid, thiacloprid and thiamethoxam) in a previous study. This allowed us to determine the long-term stability (i.e. up to 40 months) of these molecules in honey, both at room temperature and −20 °C. We found that the five pesticides were stable over a period of several years at −20 °C, but that acetamiprid and thiacloprid partially degraded at room temperature. Finally, we also measured the levels of dinotefuran, nitenpyram, sulfoxaflor and flupyradifurone and found that 28% of the samples were contaminated by at least one of these pesticides.

2018-6-27, Girod, Pierre, Borowiec, Nicolas, Buffington, Matthew, Chen, Guohua, Fang, Yuan, Kimura, Masahito T, Peris-Felipo, Francisco Javier, Ris, Nicolas, Wu, Hao, Xiao, Chun, Zhang, Jinping, Aebi, Alexandre, Haye, Tim, Kenis, Marc

Drosophila suzukii is an invasive fly of East Asian origin that has become a serious fruit pest worldwide. Classical biological control through the introduction of parasitoids from Asia could help reduce populations of D. suzukii in invaded regions. Little is known about the native parasitoids of the fly in Asia. Therefore, surveys for larval parasitoids of D. suzukii were carried out in China and Japan between 2015 and 2017. Parasitoids of D. suzukii and other fruit-inhabiting drosophilids (D. pulchrella and D. subpulchrella) that are probably attacked by the same parasitoid complex were found in four Chinese provinces and four Japanese prefectures. Larval parasitoids were obtained at most sites where D. suzukii was found, with parasitism varying from 0.0 to 75.6%. At least eight parasitoid species were reared. The most abundant and frequent parasitoids were the Figitidae Ganaspis cf. brasiliensis and Leptopilina japonica, but another Leptopilina species and at least five Braconidae species belonging to the genera Areotetes, Asobara and Tanycarpa were obtained in low numbers. Due to its likely restricted host range, the most promising parasitoid for biological control is Ganaspis cf. brasiliensis. However, its exact specificity and taxonomic status require future research.

2017-4-3, Zindel, Renate, Ofek-Lalzar, Maya, Aebi, Alexandre

There is an increasing awareness of the importance of the microbiome of arthropods to understand their host’s biology. In the bulb mite, Rhizoglyphus robini, associated bacteria have been found to be involved in its chitinolytic abilities. The bulb mite, a plant pest feeding on below- ground parts of mostly Liliaceae crops, prefers fungus- infested plants. Moreover its fitness is higher when feeding on a fungal food source than when feeding on non-infected plants. In this study we isolated a chitinolytic bacterium from mite homogenate and identified it molecularly as Serratia marcescens (Bizio 1823), which is a model organism for chitin degradation. Precise identification of the bacterium can be important for the development of biological control programs of the mite as well as for further studies investigating Serratia marcescens and its chitinolytic machinery.