A comparative study of Monte Carlo methods for efficient evaluation of marginal likelihoods
Author(s)
Basturk, Nalan
Hoogerheide, Lennart
Van Dijk, Herman
Date issued
2012
In
Computational Statistics & Data Analysis
Vol
11
No
56
From page
3398
To page
3414
Reviewed by peer
1
Subjects
Marginal likelihood Bayes factor Importance sampling Bridge sampling Adaptive mixture of Student-tt distributions
Abstract
Strategic choices for efficient and accurate evaluation of marginal likelihoods by means of Monte Carlo simulation methods are studied for the case of highly non-elliptical posterior distributions. A comparative analysis is presented of possible advantages and limitations of different simulation techniques; of possible choices of candidate distributions and choices of target or warped target distributions; and finally of numerical standard errors. The importance of a robust and flexible estimation strategy is demonstrated where the complete posterior distribution is explored. Given an appropriately yet quickly tuned adaptive candidate, straightforward importance sampling provides a computationally efficient estimator of the marginal likelihood (and a reliable and easily computed corresponding numerical standard error) in the cases investigated, which include a non-linear regression model and a mixture GARCH model. Warping the posterior density can lead to a further gain in efficiency, but it is more important that the posterior kernel be appropriately wrapped by the candidate distribution than that it is warped.
Publication type
journal article
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