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Axial versus equatorial coordination of thioether sulfur: Mixed ligand copper(II) complexes of 2-pyridyl-N-(2′-methylthiophenyl)-methyleneimine with bidentate diimine ligands

2006, Balamurugan, Ramalingam, Palaniandavar, Mallayan, Stoeckli-Evans, Helen, Neuburger, Markus

The synthesis, structure and spectral and redox properties of the copper(II) complexes [Cu(pmtpm)Cl2] (1) and [Cu(pmtpm)2](ClO4)2 (6), where pmtpm is the linear tridentate ligand 2-pyridyl-N-(2′-methylthiophenyl)methyleneimine containing a thioether and two pyridine donors, are described. Also, the mixed ligand complexes [Cu(pmtpm)(diimine)](ClO4)2 (2–5), where the diimine is 2,2′-bipyridine (bpy) (2), 1,10-phenanthroline (phen) (3), 2,9-dimethyl-1,10-phenanthroline (2,9-dmp) (4) or dipyrido-[3,2-d:2′,3′-f]-quinoxaline (dpq) (5), have been isolated and studied. The X-ray crystal structures of the complexes 1, [Cu(pmtpm)(2,9-dmp)](ClO4)2 4 and 6 have been successfully determined. The complex 1 possesses a trigonal bipyramidal distorted square based pyramidal (TBDSBP) coordination geometry in which three corners of the square plane are occupied by two nitrogens and thioether s of pmtpm ligand and the remaining equatorial and the axial positions by two chloride ions. The complex 4 contains a CuN4S chromophore also with a TBDSBP coordination geometry in which two nitrogens and the thioether sulfur of pmtpm ligand occupy three corners of the square plane. One of the two nitrogens of 2,9-dmp ligand is equatorially coordinated and the other axially to copper. On the other hand, the complex 6 is found to possess a square based pyramidal distorted trigonal bipyramidal (SPDTBP) coordination geometry. The CuN2S trigonal plane in it is comprised of the pyridine and imine nitrogens and the thioether sulfur of the pmtpm ligand. The pyridine nitrogens of the ligand occupy the axial positions and the second thioether sulfur remains uncoordinated. On long standing in acetonitrile solution the mixed ligand complexes 2 and 3 undergo ligand disproportionation to provide the corresponding bis-complexes of bpy and phen, respectively, and 6. The electronic and EPR spectral parameters and the positive redox potential of complex 4 are consistent with the equatorial location of the thioether sulfur in the square-based coordination geometry around copper(II). On the other hand, the higher g and lower A values and lower E1/2 values for the complexes 2, 3 and 5 are consistent with the axial coordination of the thioether sulfur. Also, the Cu(II)/Cu(I) redox potentials increase with increase in number of aromatic rings of the diimine ligand. The steric and electronic effects of the bidentate diimine ligands in orienting the thioether coordination to axial or equatorial position are discussed.

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Structures, spectra, and DNA-binding properties of mixed ligand copper(II) complexes of iminodiacetic acid: The novel role of diimine co-ligands on DNA conformation and hydrolytic and oxidative double strand DNA cleavage

2006, Selvakumar, Balaraman, Rajendiran, Venugopal, Maheswari, Palanisamy Uma, Stoeckli-Evans, Helen, Palaniandavar, Mallayan

The coordination geometry around copper(II) in [Cu(imda)(phen)(H2O)] (1) (H2imda = iminodiacetic acid, phen = 1,10-phenanthroline) is described as distorted octahedral while those in [Cu(imda)(5,6-dmp)] (2) (5,6-dmp = 5,6-dimethyl-1,10-phenanthroline) and [Cu(imda)(dpq)] (3) (dpq = dipyrido-[3,2-d:2′,3′-f]-quinoxaline) as trigonal bipyramidal distorted square-based pyramidal with the imda anion facially coordinated to copper(II). Absorption spectral (Kb: 1, 0.60 ± 0.04 × 103; 2, 3.9 ± 0.3 × 103; 3, 1.7 ± 0.5 × 104 M−1) and thermal denaturation studies (ΔTm: 1, 5.70 ± 0.05; 2, 5.5 ± 10; 3, 10.6 ± 10 °C) and viscosity measurements indicate that 3 interacts with calf thymus DNA more strongly than 1 and 2. The relative viscosities of DNA bound to 1 and 3 increase while that of DNA bound to 2 decreases indicating formation of kinks or bends and/or conversion of B to A conformation as revealed by the decrease in intensity of the helicity band in the circular dichroism spectrum of DNA. While 1 and 3 are bound to DNA through partial intercalation, respectively, of phen ring and the extended planar ring of dpq with DNA base stack, the complex 2 is involved in groove binding. All the complexes show cleavage of pBR322 supercoiled DNA in the presence of ascorbic acid with the cleavage efficiency varying in the order 3 > 1 > 2. The highest oxidative DNA cleavage of dpq complex is ascribed to its highest Cu(II)/Cu(I) redox potential. Oxidative cleavage studies using distamycin reveal minor groove binding for the dpq complex but a major groove binding for the phen and 5,6-dmp complexes. Also, all the complexes show hydrolytic DNA cleavage activity in the absence of light or a reducing agent with cleavage efficiency varying in the order 1 > 3 > 2.

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Synthesis, structure and DNA interaction of cobalt(III) bis-complexes of 1,3-bis(2-pyridylimino)isoindoline and 1,4,7-triazacyclononane

2005, Tamil Selvi, Pitchumony, Stoeckli-Evans, Helen, Palaniandavar, Mallayan

The complex [CoL2](ClO4) • MeOH (1), where HL is the tridentate 3N ligand 1,3-bis(2-pyridylimino)isoindoline, has been isolated and its X-ray crystal structure successfully determined. It possesses a distorted octahedral structure in which both the ligands are coordinated meridionally to cobalt(III) via one deprotonated isoindoline (L) and two pyridine nitrogen atoms. Interestingly, the average dihedral angle between pyridine and isoindoline rings is 25.9°, indicating that the ligand is twisted upon coordination to cobalt(III). The interaction of the complex with calf-thymus DNA has been studied using various spectral methods and viscosity and electrochemical measurements. For comparison, the DNA interaction of [Co(tacn)2]Cl3 (2), where tacn is facially coordinating 1,4,7-triazacyclononane, has been also studied. The ligand-based electronic spectral band of 1 and the N(σ) → Co(III) charge transfer band of 2 exhibit moderate hypochromism with small or no blue shift on interaction with DNA. The intrinsic binding constants calculated reveal that the monopositive complex ion [CoL2]+ exhibits a DNA-binding affinity lower than the tripositive complex ion [Co(tacn)2]3+. The steric clashes with DNA exterior caused by the second L ligand bound to cobalt(III), apart from the lower overall positive charge on the [CoL2]+ complex, dictates its DNA-binding mode to be surface binding rather than partial intercalative interaction expected of the extended aromatic chromophore of deprotonated isoindoline anion. An enhancement in relative viscosity of CT DNA on binding to 1 is consistent with its DNA surface binding. On the other hand, a slight decrease in viscosity of CT DNA was observed on binding to 2 revealing that the smaller cation leads to bending (kinking) and hence shortening of DNA chain length. The electrochemical studies indicate that the DNA-bound complexes are stabilised in the higher Co(III) rather than the lower Co(II) oxidation state, suggesting the importance of electrostatic forces of DNA interaction.