Quantifying Trade-Offs in the Choice of Ribosomal Barcoding Markers for Fungal Amplicon Sequencing: a Case Study on the Grapevine Trunk Mycobiome

Monod, Vinciane; Valérie Hofstetter; Vivian Zufferey; Olivier Viret; Katia Gindro; Croll, Daniel

doi:10.1128/spectrum.02513-22

Quantifying Trade-Offs in the Choice of Ribosomal Barcoding Markers for Fungal Amplicon Sequencing: a Case Study on the Grapevine Trunk Mycobiome

Author(s)

Monod, Vinciane

Faculté des sciences

Valérie Hofstetter

Vivian Zufferey

Olivier Viret

Katia Gindro

Croll, Daniel

Laboratoire de génétique évolutive

Editor(s)

Matthew Zack Anderson

Date issued

2022

In

Microbiology Spectrum

Vol

10

No

6

From page

e02513-22

Abstract

Surveying fungal communities is key to our understanding of ecological functions of diverse habitats. Fungal communities can inform about the resilience of agricultural ecosystems, risks to human health, and impacts of pathogens.

Publication type

journal article

Identifiers

https://libra.unine.ch/handle/20.500.14713/64751

DOI

10.1128/spectrum.02513-22

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