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Mitchell, Edward

Nom
Mitchell, Edward
Affiliation principale
Site web
Fonction
Professeur ordinaire
Email
edward.mitchell@unine.ch
Identifiants
https://libra.unine.ch/handle/123456789/357
_
0000-0003-0358-506X

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  • Publication
    Métadonnées seulement
    Functional microbial diversity in regenerating cutover peatlands responds to vegetation succession
    (2008)
    Artz, Rebekka
    ;
    Chapman, Steve
    ;
    Siegenthaler, Andy
    ;
    Mitchell, Edward 
    ;
    Buttler, Alexandre
    ;
    Bortoluzzi, Estelle
    ;
    Gilbert, Daniel
    ;
    Yli-Petays, Mika
    ;
    Vasander, Harri
    ;
    Francez, André-Jean
    1. While establishment of vegetation is the most visual indicator of regeneration on cutover peatland, the reinstatement of belowground functions is less well understood. Vegetation succession results in differences in peat quality in terms of C availability. The respiratory response of the soil microbial community to ecologically relevant substrates (community-level physiological profile, CLPP) such as those found in rhizosphere exudates and litter hydrolysates, is thought to reflect the activity and functional diversity of the soil microbial community, especially those involved in turnover of soluble photosynthate-derived C. 2. The relationship between CLPP and typical regeneration stages was investigated at five European peatlands, each with up to five sites representing a gradient of natural regeneration stages. We aimed to determine whether unaided revegetation consistently affected soil microbial CLPP, which environmental factors explained variation in CLPP on the scale of individual peatlands, and if these factors were consistent across different peatlands. 3. Within each peatland, a decomposition index based on diagnostic bands in Fourier transform-infrared spectra indicated that regeneration had generally started from a common base and that the influence of vegetation on the decomposition index declined with depth. In parallel, differences in vegetation cover between regeneration stages resulted in significantly different CLPP, but this effect decreased rapidly with soil depth. The magnitudes of the effect of vegetation succession versus soil depth appeared to be linked with the age range of the regeneration gradients. Hence, the effect of vegetation on CLPP is effectively diluted due to the remaining organic matter. Specific plant species described significant proportions of CLPP variability but these species were not consistent across peatland types. The effects of soil depth appeared to be peatland-specific. 4. Synthesis and applications. Together, the results indicate significant responses of the microbial community to vegetation succession, with the strength of the effect probably dependent on quantities of labile C allocation to the soil microbial community. Therefore, particularly in the early stages of regeneration of cutover peatlands, CLPP could provide vital information about the relative importance of different plant functional types on potential rates of labile C turnover.
  • Publication
    Accès libre
    Functional microbial diversity in regenerating cutover peatlands responds to vegetation succession
    (2008)
    Artz, Rebekka R. E.
    ;
    Chapman, Stephen J.
    ;
    Siegenthaler, Andy
    ;
    Mitchell, Edward 
    ;
    Buttler, Alexandre
    ;
    Bortoluzzi, Estelle
    ;
    Gilbert, Daniel
    ;
    Yli-Petays, Mika
    ;
    Vasander, Harri
    ;
    Francez, André-Jean
    1. While establishment of vegetation is the most visual indicator of regeneration on cutover peatland, the reinstatement of belowground functions is less well understood. Vegetation succession results in differences in peat quality in terms of C availability. The respiratory response of the soil microbial community to ecologically relevant substrates (community-level physiological profile, CLPP) such as those found in rhizosphere exudates and litter hydrolysates, is thought to reflect the activity and functional diversity of the soil microbial community, especially those involved in turnover of soluble photosynthate-derived C.
    2. The relationship between CLPP and typical regeneration stages was investigated at five European peatlands, each with up to five sites representing a gradient of natural regeneration stages. We aimed to determine whether unaided revegetation consistently affected soil microbial CLPP, which environmental factors explained variation in CLPP on the scale of individual peatlands, and if these factors were consistent across different peatlands.
    3. Within each peatland, a decomposition index based on diagnostic bands in Fourier transform-infrared spectra indicated that regeneration had generally started from a common base and that the influence of vegetation on the decomposition index declined with depth. In parallel, differences in vegetation cover between regeneration stages resulted in significantly different CLPP, but this effect decreased rapidly with soil depth. The magnitudes of the effect of vegetation succession versus soil depth appeared to be linked with the age range of the regeneration gradients. Hence, the effect of vegetation on CLPP is effectively diluted due to the remaining organic matter. Specific plant species described significant proportions of CLPP variability but these species were not consistent across peatland types. The effects of soil depth appeared to be peatland-specific.
    4. Synthesis and applications. Together, the results indicate significant responses of the microbial community to vegetation succession, with the strength of the effect probably dependent on quantities of labile C allocation to the soil microbial community. Therefore, particularly in the early stages of regeneration of cutover peatlands, CLPP could provide vital information about the relative importance of different plant functional types on potential rates of labile C turnover.
  • Publication
    Accès libre
    Ecology of Testate Amoebae from Mires in the Central Rhodope Mountains, Greece and Development of a Transfer Function for Palaeohydrological Reconstruction
    (2007)
    Payne, Richard J.
    ;
    Mitchell, Edward 
    ;
    Payne, Richard J.
    ;
    Mitchell, Edward 
    Testate amoebae are useful environmental indicators in ecological and palaeoecological studies from peatlands. Previous quantitative studies have focused on the peatlands of Northern and Central Europe, North America, and New Zealand and have considered a relatively restricted variety of peatland types, mostly ombrotrophic or Sphagnum-dominated while more minerotrophic fens have been less studied. Here we present the first quantitative ecological study of testate amoebae from four small mesotrophic fens (pH 5.5–8.1) in the Elatia Forest, northern Macedonia province, Greece. Relationships with the environmental data were investigated using redundancy analysis and mantel tests. Transfer function models were derived using a variety of techniques. Results demonstrate that as for Sphagnum-dominated mires hydrology is the most important control on amoebae community composition. Transfer function models should enable water tables to be predicted within 2.5 cm, when data selection is used this is reduced to less than 2 cm. pH is also an important environmental control on testate amoebae communities, a transfer function model enables pH prediction within 0.4 pH units. The hydrological transfer function is the best performing such model yet produced in terms of prediction error. This study provides new data on the ecology of testate amoebae in fens, and the transfer function models should allow quantitative palaeohydrological reconstruction.
  • Publication
    Accès libre
    Raised atmospheric CO2 levels and increased N deposition cause shifts in plant species composition and production in Sphagnum bogs
    (2001)
    Berendse, Frank
    ;
    van Breemen, Nico
    ;
    Rydin, HÅkan
    ;
    Buttler, Alexandre
    ;
    Heijmans, Monique
    ;
    Hoosbeek, Marcel R.
    ;
    Lee, John A.
    ;
    Mitchell, Edward 
    ;
    Saarinen, Timo
    ;
    Vasander, Harri
    ;
    Wallén, Bo
    Part of the missing sink in the global CO2 budget has been attributed to the positive effects of CO2 fertilization and N deposition on carbon sequestration in Northern Hemisphere terrestrial ecosystems. The genus Sphagnum is one of the most important groups of plant species sequestrating carbon in temperate and northern bog ecosystems, because of the low decomposability of the dead material it produces. The effects of raised CO2 and increased atmospheric N deposition on growth of Sphagnum and other plants were studied in bogs at four sites across Western Europe. Contrary to expectations, elevated CO2 did not significantly affect Sphagnum biomass growth. Increased N deposition reduced Sphagnum mass growth, because it increased the cover of vascular plants and the tall moss Polytrichum strictum. Such changes in plant species composition may decrease carbon sequestration in Sphagnum-dominated bog ecosystems.
  • Publication
    Métadonnées seulement
    Ecology of testate amoebae (Protozoa : Rhizopoda) in Sphagnum peatlands in the Jura mountains, Switzerland and France
    (1999-5-2)
    Mitchell, Edward 
    ;
    Buttler, Alexandre
    ;
    Warner, Barry
    ;
    Gobat, Jean-Michel 
    Testate amoebae (Protozoa) living in Sphagnum peatlands are important environmental and paleoecological indicators. The distribution of these animals is closely related to soil moisture variables. This study examines the ecology of sphagnicolous testate amoebae near the southern limit of bogs in Europe. A total of 64 samples were collected for analysis of testate amoebae from six peatlands in the Jura region of Switzerland and France. Eleven site-specific ecological variables, six of which were soil-moisture related variables, were measured at each site. The data were subjected to weighted averaging, jack-knifing, cluster analysis, canonical correspondence analysis, and the indicator value method to model relationships between testate amoebae distributions and environmental variables. Testate amoebae abundance showed a direct relationship with pear pH and depth to water table. Strong relationships were with sites that had a water table less than 41 cm deep. In drier sites with water table depth greater than 41 cm, other factors such as soil porosity and water holding capacity were more important compared to the wetter sites. Though there was a strong relationship between restate amoebae faunas and soil moisture content and porosity, these two variables could not be confidently predicted. Testate amoebae in peatlands in this region appear to be sensitive to peat pH and water tables. Further work is needed to explore relationships between restate amoebae, soil moisture, and porosity.
  • Publication
    Accès libre
    One Alga to Rule them All: Unrelated Mixotrophic Testate Amoebae (Amoebozoa, Rhizaria and Stramenopiles) Share the Same Symbiont (Trebouxiophyceae)
    Gomaa, Fatma
    ;
    Kosakyan, Anush 
    ;
    Heger, Thierry J
    ;
    Corsaro, Daniele
    ;
    Mitchell, Edward 
    ;
    Lara, Enrique 
    Endosymbiosis is a central and much studied process in the evolution of eukaryotes. While plastid evolution in eukaryotic algae has been extensively studied, much less is known about the evolution of mixotrophy in amoeboid protists, which has been found in three of the five super groups of Eukaryotes. We identified the green endosymbionts in four obligate mixotrophic testate amoeba species belonging to three major eukaryotic clades, Hyalosphenia papilio and Heleopera sphagni (Amoebozoa: Arcellinida), Placocista spinosa (Rhizaria: Euglyphida), and Archerella flavum (Stramenopiles: Labyrinthulomycetes) based on rbcL (ribulose-1,5-diphosphate carboxylase/oxygenase large subunit) gene sequences. We further investigated whether there were different phylotypes of algal endosymbionts within single H. papilio cells and the degree of host-symbiont specificity by amplifying two genes: COI (mitochondrial cytochrome oxydase subunit 1) from the testate amoeba host, and rbcL from the endosymbiont. Results show that all studied endosymbionts belong to genus Chlorella sensu stricto, closely related to Paramecium bursaria Chlorella symbionts, some lichen symbionts and also several free-living algae. Most rbcL gene sequences derived from symbionts from all testate amoeba species were almost identical (at most 3 silent nucleotides difference out of 780 bp) and were assigned to a new Trebouxiophyceae taxon we named TACS (Testate Amoeba Chlorella Symbionts). This “one alga fits all mixotrophic testate amoeba” pattern suggests that photosynthetic symbionts have pre-adaptations to endosymbiosis and colonise diverse hosts from a free-living stage.