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  • Publication
    Accès libre
    Coupling X-ray computed tomography and freeze-coring for the analysis of fine-grained low-cohesive soils
    (2017-12-15)
    Liernur, Adrien
    ;
    ;
    Turberg, Pascal
    ;
    Guenat, Claire
    ;
    ;
    This paper presents the coupling of freeze-core sampling with X-ray CT scanning for the analysis of the soil structure of fine-grained, low-cohesive soils. We used a medical scanner to image the 3D soil structure of the frozen soil cores, providing X-ray CT data at a millimetric resolution over freeze-cores that are up to 62.5 cm long and 25 cm wide. The obtained data and the changes in gray level values could be successfully used to identify and characterize different soil units with distinctly different physical properties. Traditional measurements of soil bulk density, carbon and particle size analyses were conducted within each of the identified soil units. These observations were used to develop a 3D model of soil bulk density and organic matter distribution for five freeze-cores obtained at a restored floodplain in Switzerland. The millimetric X-ray CT scanning was applied to detect the impact of freeze-coring on the soil structural integrity. This allows identifying undisturbed zones, a critical precondition for any subsequent assessment of soil structure. The proposed coupling is thought to be applicable to a wide range of other low-cohesive soil types and has a large potential for applications in hydrogeology, biology or soil science.
  • Publication
    Accès libre
    Effects of endogeic earthworms on the soil organic matter dynamics and the soil structure in urban and alluvial soil materials
    Earthworms are considered as key actors of soil processes at different spatial and temporal scales and provide essential ecosystem services linked to climate regulation or primary production. However, little is known about their basic functional roles (e.g. organic matter decomposition, soil structuring processes) in perturbed systems such as urban or alluvial soils. Alluvial soils are characterized by regular physical perturbation through flooding and associated erosion/sedimentation processes which are rather similar to perturbations (e.g. temporal instability, spatial heterogeneity) affecting urban soils. Due to their close soil characteristics, we hypothesized that in both cases, soil functioning is similarwith respect to soil fauna activity. Under controlled conditions, our objective was to investigate the effects of two endogeic earthworm species, Allolobophora chlorotica (pink morph) and Aporrectodea rosea (the two most abundant species found in the studied urban site), on soil organic matter (SOM) dynamics and soil structure (network of earthworm burrows) comparing an urban and an alluvial soil. We investigated the growth of individuals (weight gain and reproduction success) and assessed their effects on SOMdecomposition (cumulative C–CO2 emission, nitrogen and phosphorus mineralization) and soil structure (macroporosity, total length and connectivity of segments) after one and three months of incubation. Our results showed higher growth of A. rosea in the alluvial soil compared to the urban soil. However, the total length of burrows, carbon and nitrogen mineralization were often higher in the urban soil especially when the two species were combined. This trend can be mainly explained by lower organic matter content found in the urban soil whichmay influence positively the burrowing activity and negatively the growth of earthworms. Endogeic earthworms appear a key feature of the soil functioning in the urban context through their roles on organic matter transformation, the formation and maintenance of the soil structure.
  • Publication
    Accès libre
    Influence of some physicochemical and biological parameters on soil structure formation in alluvial soils
    (2007)
    Bullinger-Weber, G.
    ;
    ; ;
    Guenat, Claire
    This study examines the role of abiotic (texture, calcium carbonates or iron) and biotic parameters (earthworm and enchytraeid activities) on the initial phases of soil aggregation. Our research focused on humus forms in alluvial soils, which are considered as young and heterogeneous environments. We hypothesized that the soil structure formation is determined by both the nature of the recent alluvial deposits and the soil fauna. For this purpose, six sites were chosen throughout two types of softwood forests (willow and alder forest) representing two stages of vegetation succession. Evidence of soil texture influence on aggregate stability was observed. A dominance of a coarse sand fraction caused a quick colonization of enchytraeids and epigeic earthworms while a silty texture favoured the presence of anecic earthworms, thus increasing the aggregate stabilisation. Iron forms, acting as cementing agents, were observed in the coarse silt, while calcium carbonates were equally distributed among the textural fractions. Active calcium carbonate fraction, binding organic matter with mineral components, was not found in the coarse sand fraction. In conclusion, the tree age cannot alone be used as an indicator of the humus form evolution but biological and physicochemical parameters also influence the initial steps of soil structuration.
  • Publication
    Accès libre
    Effects of endogeic earthworms on the soil organic matter dynamics and the soil structure in urban and alluvial soil materials
    ;
    Turberg, Pascal
    ;
    Kohler-Milleret, Roxane
    ;
    ;
    Earthworms are considered as key actors of soil processes at different spatial and temporal scales and provide essential ecosystem services linked to climate regulation or primary production. However, little is known about their basic functional roles (e.g. organic matter decomposition, soil structuring processes) in perturbed systems such as urban or alluvial soils. Alluvial soils are characterized by regular physical perturbation through flooding and associated erosion/sedimentation processes which are rather similar to perturbations (e.g. temporal instability, spatial heterogeneity) affecting urban soils. Due to their close soil characteristics, we hypothesized that in both cases, soil functioning is similar with respect to soil fauna activity. Under controlled conditions, our objective was to investigate the effects of two endogeic earthworm species, Allolobophora chlorotica (pink morph) and Aporrectodea rosea (the two most abundant species found in the studied urban site), on soil organic matter (SOM) dynamics and soil structure (network of earthworm burrows) comparing an urban and an alluvial soil. We investigated the growth of individuals (weight gain and reproduction success) and assessed their effects on SOM decomposition (cumulative C–CO2 emission, nitrogen and phosphorus mineralization) and soil structure (macroporosity, total length and connectivity of segments) after one and three months of incubation. Our results showed higher growth of A. rosea in the alluvial soil compared to the urban soil. However, the total length of burrows, carbon and nitrogen mineralization were often higher in the urban soil especially when the two species were combined. This trend can be mainly explained by lower organic matter content found in the urban soil which may influence positively the burrowing activity and negatively the growth of earthworms. Endogeic earthworms appear a key feature of the soil functioning in the urban context through their roles on organic matter transformation, the formation and maintenance of the soil structure.
  • Publication
    Accès libre
    Coupling X-ray computed tomography and freeze-coring for the analysis of fine-grained low-cohesive soils
    Liernur, Adrien
    ;
    Schomburg, Andreas
    ;
    Turberg, Pascal
    ;
    Guenat, Claire
    ;
    ;
    This paper presents the coupling of freeze-core sampling with X-ray CT scanning for the analysis of the soil structure of fine-grained, low-cohesive soils. We used a medical scanner to image the 3D soil structure of the frozen soil cores, providing X-ray CT data at a millimetric resolution over freeze-cores that are up to 62.5 cm long and 25 cm wide. The obtained data and the changes in gray level values could be successfully used to identify and characterize different soil units with distinctly different physical properties. Traditional measurements of soil bulk density, carbon and particle size analyses were conducted within each of the identified soil units. These observations were used to develop a 3D model of soil bulk density and organic matter distribution for five freeze-cores obtained at a restored floodplain in Switzerland. The millimetric X-ray CT scanning was applied to detect the impact of freeze-coring on the soil structural integrity. This allows identifying undisturbed zones, a critical precondition for any subsequent assessment of soil structure. The proposed coupling is thought to be applicable to a wide range of other low-cohesive soil types and has a large potential for applications in hydrogeology, biology or soil science.