Login

Publications

Titre  
 
Chapitres de livres
Joseph, E., Letardi, P., Comensoli, L., Simon, A., Junier, P., Job, D., & Wörle, M. (2013). Assessment of a biological approach for the protection of copper alloys artefacts. In Conference Proceedings of Metal 2013, Interim Meeting of the ICOM-CC Metal WG. Edinburgh, Scotland. 16th-20th September 2013.. (ISBN Print: 978-1-84917-142-7, ISBN Digital: 978-1-84917-132-8 ed., pp. 203-207). Edinburgh: Historic Scotland and International Council of Museums.
   
Articles de périodiques
Wunderlin, T., Junier, T., Paul, C., Jeanneret, N., & Junier, P. (2016). Physical Isolation of Endospores from Environmental Samples by Targeted Lysis of Vegetative Cells. J Vis Exp(107).
   
Bueche, M., & Junier, P. (2016). Effect of organic carbon and metal accumulation on the bacterial communities in sulphidogenic sediments. Environ Sci Pollut Res Int.
   
Andres-Barrao, C., Saad, M., Cabello Ferrete, E., Bravo, D., Chappuis, M. L., Ortega Perez, R., Junier, P., Perret, X., & Barja, F. (2016). Metaproteomics and ultrastructure characterization of Komagataeibacter spp. involved in high-acid spirit vinegar production. Food Microbiol, 55, 112-22.
   
Simon, A., Bindschedler, S., Job, D., Wick, L. Y., Filippidou, S., Kooli, W. M., Verrecchia, E. P., & Junier, P. (2015). Exploiting the fungal highway: development of a novel tool for the in situ isolation of bacteria migrating along fungal mycelium. FEMS Microbiol Ecol, 91(11).
   
Junier, T., Herve, V., Wunderlin, T., & Junier, P. (2015). MLgsc: A Maximum-Likelihood General Sequence Classifier. PLoS One, 10(7).
   
Filippidou, S., Wunderlin, T., Junier, T., Jeanneret, N., Johnson, S., McMurry, K., Gleasner, C. D., Lo, C. C., Li, P. E., Vuyisich, M., Chain, P. S., & Junier, P. (2015). Genome Sequence of Bacillus alveayuensis Strain 24KAM51, a Halotolerant Thermophile Isolated from a Hydrothermal Vent. Genome Announc, 3(4).
   
Filippidou, S., Junier, T., Wunderlin, T., Lo, C. C., Li, P. E., Chain, P. S., & Junier, P. (2015). Under-detection of endospore-forming Firmicutes in metagenomic data. Comput Struct Biotechnol J, 13, 299-306.
   
Filippidou, S., Jaussi, M., Junier, T., Wunderlin, T., Roussel-Delif, L., Jeanneret, N., Vieth-Hillebrand, A., Vetter, A., Regenspurg, S., Johnson, S., McMurry, K., Gleasner, C. D., Lo, C. C., Li, P. E., Vuyisich, M., Chain, P. S., & Junier, P. (2015). Genome Sequence of Anoxybacillus geothermalis Strain GSsed3, a Novel Thermophilic Endospore-Forming Species. Genome Announc, 3(3).
   
Filippidou, S., Jaussi, M., Junier, T., Wunderlin, T., Jeanneret, N., Regenspurg, S., Li, P. E., Lo, C. C., Johnson, S., McMurry, K., Gleasner, C. D., Vuyisich, M., Chain, P. S., & Junier, P. (2015). Genome Sequence of Aeribacillus pallidus Strain GS3372, an Endospore-Forming Bacterium Isolated in a Deep Geothermal Reservoir. Genome Announc, 3(4).
   
Bergottini, V. M., Otegui, M. B., Sosa, D., Zapata, P. D., Mulot, M., Rebord, M., Zopfi, J., Wiss, F., Benrey, B., & Junier, P. (2015). Bio-inoculation of yerba mate seedlings (Ilex paraguariensis St. Hill.) with native plant growth-promoting rhizobacteria: a sustainable alternative to improve crop yield. Biology and Fertility of Soils, 51(6), 749-755.
   
Bergottini, V. M., Filippidou, S., Junier, T., Johnson, S., Chain, P. S., Otegui, M. B., Zapata, P. D., & Junier, P. (2015). Genome Sequence of Kosakonia radicincitans Strain YD4, a Plant Growth-Promoting Rhizobacterium Isolated from Yerba Mate (Ilex paraguariensis St. Hill.). Genome Announc, 3(2).
   
Bravo, D., Braissant, O., Cailleau, G., Verrecchia, E., & Junier, P. (2015). Isolation and characterization of oxalotrophic bacteria from tropical soils. Archives in Microbiology, 197, 65-77.
   
Cailleau, G., Mota, M., Bindschedler, S., Junier, P., & Verrecchia, E. (2014). Detection of active oxalate?carbonate pathway ecosystems in the Amazon Basin: Global implications of a natural potential C sink. CATENA, 116, 132-141.
   
Sauvain, L., Bueche, M., Junier, T., Masson, M., Wunderlin, T., Kohler-Milleret, R., Diez, E. G., Loizeau, J. L., Tercier-Waeber, M. L., & Junier, P. (2014). Bacterial communities in trace metal contaminated lake sediments are dominated by endospore-forming bacteria. Aquatic Sciences, 76(1), 33-46.
   
Wunderlin, T., Corella, J. P., Junier, T., Bueche, M., Loizeau, J. L., Girardclos, S., & Junier, P. (2014). Endospore-forming bacteria as new proxies to assess impact of eutrophication in Lake Geneva (Switzerland?France). Aquatic Sciences, 76(1), 103-116.
   
Wunderlin, T., Junier, T., Roussel-Delif, L., Jeanneret, N., & Junier, P. (2014). Endospore-enriched sequencing approach reveals unprecedented diversity of Firmicutes in sediments. Environmental microbiology reports.
   
Junier, P. (2014). Genetic diversity of Rhizobium present in nodules of Phaseolus vulgaris L. cultivated in two soils of the central region in Chile. Applied Soil Ecology, Accepted, 1-1.
   
Bueche, M., Wunderlin, T., Roussel-Delif, L., Junier, T., Sauvain, L., Jeanneret, N., & Junier, P. (2013). Quantification of endospore-forming Firmicutes by quantitative PCR with the functional gene spo0A. Applied and environmental microbiology, 79(17), 5302-5312.
   
Bravo, D., Martin, G., David, M. M., Cailleau, G., Verrecchia, E., & Junier, P. (2013). Identification of active oxalotrophic bacteria by Bromodeoxyuridine DNA labeling in a microcosm soil experiments. FEMS microbiology letters, 348(2), 103-111.
   
Bravo, D., Cailleau, G., Bindschedler, S., Simon, A., Job, D., Verrecchia, E., & Junier, P. (2013). Isolation of oxalotrophic bacteria able to disperse on fungal mycelium. FEMS microbiology letters, 348(2), 157-166.
   
Junier, P., Kim, O. S., Imhoff, J. F., Witzel, K. P., & Hadas, O. (2013). Effect of salinity on cyanobacterial community composition along a transect from Fuliya spring into the water of Lake Kinneret, Israel. Fundamental and Applied Limnology/Archiv für Hydrobiologie, 182(2), 99-107.
   
Pion, M., Spangenberg, J. E., Simon, A., Bindschedler, S., Flury, C., Chatelain, A., Bshary, R., Job, D., & Junier, P. (2013). Bacterial farming by the fungus Morchella crassipes. Proceedings of the Royal Society B: Biological Sciences, 280(1773).
   
Pion, M., Bshary, R., Bindschedler, S., Filippidou, S., Wick, L. Y., Job, D., & Junier, P. (2013). Gains of Bacterial Flagellar Motility in a Fungal World. Applied and environmental microbiology, 79(22), 6862-6867.
   
Wunderlin, T., Junier, T., Roussel-Delif, L., Jeanneret, N., & Junier, P. (2013). Stage 0 sporulation gene A as a molecular marker to study diversity of endospore-forming Firmicutes. Environmental microbiology reports, 5(6), 911-924.
   
Junier, P. (2013). Detection of active oxalate-carbonate pathway ecosystems in the Amazon Basin: global implications of a natural potential C sink. Catena, 116, 132-141.
   
Martin, G., Guggiari, M., Bravo, D., Zopfi, J., Cailleau, G., Aragno, M., Job, D., Verrecchia, E., & Junier, P. (2012). Fungi, bacteria and soil pH: the oxalate?carbonate pathway as a model for metabolic interaction. Environmental microbiology, 14(11), 2960-2970.
   
Bravo, D., Braissant, O., Solokhina, A., Clerc, M., Daniels, A. U., Verrecchia, E., & Junier, P. (2011). Use of an isothermal microcalorimetry assay to characterize microbial oxalotrophic activity. FEMS microbiology ecology, 78(2), 266-274.
   
Guggiari, M., Bloque, R., Aragno, M., Verrecchia, E., Job, D., & Junier, P. (2011). Experimental calcium-oxalate crystal production and dissolution by selected wood-rot fungi. International Biodeterioration & Biodegradation, 65(6), 803-809.
   
Joseph, E., Cario, S., Simon, A., Wörle, M., Mazzeo, R., Junier, P., & Job, D. (2011). Protection of metal artifacts with the formation of metal?oxalates complexes by Beauveria bassiana. Frontiers in microbiology, 2.
   
Junier, P., Vecchia, E. D., & Bernier-Latmani, R. (2011). The Response of Desulfotomaculum reducens MI-1 to U (VI) Exposure: A Transcriptomic Study. Geomicrobiology Journal, 28(5-6), 483-496.
   
Kim, O. S., Imhoff, J. F., Witzel, K. P., & Junier, P. (2011). Distribution of denitrifying bacterial communities in the stratified water column and sediment?water interface in two freshwater lakes and the Baltic Sea. Aquatic ecology, 45(1), 99-112.
   
Sharp, J. O., Lezama-Pacheco, J. S., Schofield, E. J., Junier, P., Ulrich, K. U., Chinni, S., Veeramani, H., Margot-Roquier, C., Webb, S. M., & Tebo, B. M. (2011). Uranium speciation and stability after reductive immobilization in aquifer sediments. Geochimica et Cosmochimica Acta, 75(21), 6497-6510.
   
Bernier-Latmani, R., Veeramani, H., Vecchia, E. D., Junier, P., Lezama-Pacheco, J. S., Suvorova, E. I., Sharp, J. O., Wigginton, N. S., & Bargar, J. R. (2010). Non-uraninite products of microbial U (VI) reduction. Environmental science & technology, 44(24), 9456-9462.
   
Beier, S., Kim, O. S., Junier, P., Bertilsson, S., & Witzel, K. P. (2010). Betaproteobacterial ammonia oxidizers in root zones of aquatic macrophytes. Fundamental and Applied Limnology/Archiv für Hydrobiologie, 177(4), 241-255.
   
Junier, P., Junier, T., Podell, S., Sims, D. R., Detter, J. C., Lykidis, A., Han, C. S., Wigginton, N. S., Gaasterland, T., & Bernier-Latmani, R. (2010). The genome of the Gram?positive metal?and sulfate?reducing bacterium Desulfotomaculum reducens strain MI?1. Environmental microbiology, 12(10), 2738-2754.
   
Junier, P., Kim, O. S., Eckert, W., Casper, P., Imhoff, J. F., Witzel, K. P., & Hadas, O. (2010). Methane- and ammonia-oxidizing bacteria at the chemocline of Lake Kinneret (Israel). Aquatic microbial ecology, 58(3), 241-248.
   
Junier, P., Suvorova, E. I., & Bernier-Latmani, R. (2010). Effect of competing electron acceptors on the reduction of U (VI) by Desulfotomaculum reducens. Geomicrobiology Journal, 27(5), 435-443.
   
Junier, P., Molina, V., Dorador, C., Hadas, O., Kim, O. S., Junier, T., Witzel, K. P., & Imhoff, J. F. (2010). Phylogenetic and functional marker genes to study ammonia-oxidizing microorganisms (AOM) in the environment. Applied microbiology and biotechnology, 85(3), 425-440.
   
Junier, T., & Junier, P. (2010). Descended from refuse. Science, 330(6002), 322-322.
   
Regenspurg, S., Margot-Roquier, C., Harfouche, M., Froidevaux, P., Steinmann, P., Junier, P., & Bernier-Latmani, R. (2010). Speciation of naturally-accumulated uranium in an organic-rich soil of an alpine region (Switzerland). Geochimica et Cosmochimica Acta, 74(7), 2082-2098.
   
Junier, P., Frutschi, M., Wigginton, N. S., Schofield, E. J., Bargar, J. R., & Bernier-Latmani, R. (2009). Metal reduction by spores of Desulfotomaculum reducens. Environmental microbiology, 11(12), 3007-3017.
   
Junier, P., Carú, M., & Witzel, K. P. (2009). Effect of common bean (Phaseolus vulgaris L.) on the community composition of ammonia-oxidizing bacteria in soil previously cultivated with< i> Medicago sativa. European Journal of Soil Biology, 45(3), 252-258.
   
Junier, P., Junier, T., Witzel, K. P., & Carú, M. (2009). Composition of diazotrophic bacterial assemblages in bean-planted soil compared to unplanted soil. European Journal of Soil Biology, 45(2), 153-162.
   
Junier, P., Kim, O. S., Junier, T., Ahn, T. S., Imhoff, J. F., & Witzel, K. P. (2009). Community analysis of betaproteobacterial ammonia-oxidizing bacteria using the amoCAB operon. Applied microbiology and biotechnology, 83(1), 175-188.
   
Dhiaf, A., Junier, P., Bakhrouf, A., & Witzel, K. P. (2008). Resuscitation of ten-year VBNC Klebsiella oxytoca. Cahiers de biologie marine, 49(1), 17-22.
   
Junier, P., Junier, T., & Witzel, K. P. (2008). TRiFLe, a program for in silico terminal restriction fragment length polymorphism analysis with user-defined sequence sets. Applied and environmental microbiology, 74(20), 6452-6456.
   
Junier, P., Kim, O. S., Hadas, O., Imhoff, J. F., & Witzel, K. P. (2008). Evaluation of PCR primer selectivity and phylogenetic specificity by using amplification of 16S rRNA genes from betaproteobacterial ammonia-oxidizing bacteria in environmental samples. Applied and environmental microbiology, 74(16), 5231-5236.
   
Junier, P., Kim, O. S., Molina, V., Limburg, P., Junier, T., Imhoff, J. F., & Witzel, K. P. (2008). Comparative in silico analysis of PCR primers suited for diagnostics and cloning of ammonia monooxygenase genes from ammonia?oxidizing bacteria. FEMS microbiology ecology, 64(1), 141-152.
   
Junier, P., Kim, O. S., Witzel, K. P., Imhoff, J. F., & Hadas, O. (2008). Habitat partitioning of denitrifying bacterial communities carrying nirS or nirK genes in the stratified water column of Lake Kinneret, Israel. Aquatic microbial ecology, 51(2).
   
Kim, O. S., Junier, P., Imhoff, J. F., & Witzel, K. P. (2008). Comparative analysis of ammonia monooxygenase (amoA) genes in the water column and sediment?water interface of two lakes and the Baltic Sea. FEMS microbiology ecology, 66(2), 367-378.
   
Junier, P., Witzel, K. P., & Hadas, O. (2007). Genetic diversity of cyanobacterial communities in Lake Kinneret (Israel) using 16S rRNA gene, psbA and ntcA sequence analyses. Aquatic microbial ecology, 49(3), 233-241.
   
Molina, V., Ulloa, O., Farías, L., Urrutia, H., Ramírez, S., Junier, P., & Witzel, K. P. (2007). Ammonia-oxidizing beta-proteobacteria from the oxygen minimum zone off northern Chile. Applied and environmental microbiology, 73(11), 3547-3555.
   
 
Page 1 de 1
*Format bibliographique : APA5