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Publications

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Livres
Hunkeler, D., Goldscheider, N., Rossi, P., & Burn, C. (2006). Biozönosen im Grundwasser: Grundlagen und Methoden der Charakterisierung von mikrobiellen Gemeinschaften: Bundesamt für Umwelt, BAFU.
   
Livres édités
Milnes, E., Meilhac, C., Yeo, D., Renard, P., Hunkeler, D., Schnegg, P. A., & Bourret, F. (Eds.). (2006). Hydrogeochemical and hydrogeological investigation in the Akrotiri aquifer: identification of multiple salinisation processes and implementation criteria for monitoring networks; Proceedings of the 1st SWIM-SWICA meeting, September 2006..
   
Chapitres de livres
Blum, P., Hunkeler, D., Weede, M., Beyer, C., Grathwohl, P., & Morasch, B. (2007). Quantification of biodegradation for various organic compounds using first-order, Michaelis-Menten kinetics and stable carbon isotopes. In Geophysical Research Abstracts. (Vol. 9). Vienna: EGU General Assembly.
   
Goldscheider, N., Hunkeler, D., Weede, M., Beyer, C., Grathwohl, P., & Morasch, B. (2007). Heterogeneous aquifers as habitats for microbial biocenoses. In Proceedings XXXV IAH Congress on Groundwater and Ecosystems, Lisbon. (pp. 302-303).
   
Milnes, E., Meilhac, C., Yeo, D., Renard, P., Hunkeler, D., Schnegg, P. A., & Bourret, F. (2006). Hydrogeochemical and hydrogeological investigation in the Akrotiri aquifer: identification of multiple salinisation processes and implementation criteria for monitoring networks. In Proceedings of the 1st SWIM-SWICA meeting. Cagliari:
   
De Weert, J., Van der Zaan, B., Gerritse, J., Langenhoff, A., Tas, N., Van Eekert, M. ., Schraa, G., Smidt, H., Albrechtsen, H. J., Morasch, B., Hoenener, P., & Hunkeler, D. (2005). Biodegradation of organic pollutants and molecular identification of responsible microorganisms in several European river basins. In Proceedings of the 9th International FZK/TNO Conference on Soil-Water Systems, Bordeaux. (pp. 2837-2838).
   
Morasch, B., Höhener, P., & Hunkeler, D. (2005). One method may not be enough: evaluation of intrinsic contaminant degradation. In P. Canepa, & F. . Fava (Eds.) Biomonitoring, Bioavailability and Microbial Transformation of Pollutants in Sediments and Approaches to Stimulate their Biodegradation. (pp. 183-184). Venice: INCA.
   
Morasch, B., & Hunkeler, D. (2005). Isotopenfraktionierung zur Bestimmung des natürlichen Abbaus von chlrierten Kohlenwasserstoffen. In Perspektiven molekularer und isotopischer Methoden zum Nachweis des natürlichen Schadstoffabbaus in Böden. (pp. 31-38). Böden: BMBF Förderschwerpunkt KORA/DECHEMA-IAK.
   
Morasch, B., Meckenstock, R., Richnow, H., & Hunkeler, D. (2005). Bacterial contaminant degradation in the environment - a quantitative approach based on stable isotope analysis. In Proceedings of the 9th International FZK/TNO Conference on Soil-Water Systems. (pp. 637-644). Bordeaux:
   
Articles de périodiques
Hunkeler, D., Käser, D., Grosvernier, P., & Cochand, F. (2020). Assessing the perturbations of the hydrogeological regime in sloping fens due to roads. Hydrology and Earth System Sciences, 24(1), 213-226.
   
Kropf, P., Kurtz, W., Lapin, A., Schilling, O., Tang, Q., Schiller, E., Braun, T., Hunkeler, D., Vereecken, H., Sudicky, E., & Franssen, H. J. H. (2017). Integrating hydrological modelling, data assimilation and cloud computing for real-time management of water resources. Environmental Modelling and Software, 93, 418-435.
   
Möck, C., Brunner, P., & Hunkeler, D. (2014). Pilot point calibration using PEST applied to HydroGeoSphere. Environmental Modeling and Software, in revision.
   
Breider, F., & Hunkeler, D. (2014). Investigating chloroperoxidase-catalyzed formation of chloroform from humic substances using stable chlorine isotope analysis. Environmental Science and Technology, 48(3), 1592-1600.
   
Breider, F., & Hunkeler, D. (2014). Mechanistic insights into the formation of chloroform from natural organic matter using stable carbon isotope analysis. Geochimica et Cosmochimica Acta, 125, 85-95.
   
Broholm, M. M., Hunkeler, D., Tuxen, N., Jeannottat, S., & Scheutz, C. (2014). Stable carbon isotope analysis to distinguish biotic and abiotic degradation of 1,1,1-trichloroethane in groundwater sediments. Chemosphere.
   
Bouchard, D., & Hunkeler, D. (2014). Solvent-based dissolution method to sample gas-phase volatile organic compounds for compound-specific isotope analysis. Journal of Chromatography A, 1325, 16-22.
   
Wu, Y., & Hunkeler, D. (2013). Hyporheic exchange in a karst conduit and sediment system - A laboratory analog study. Journal of Hydrology, 501, 125-132.
   
Möck, C., Brunner, P., & Hunkeler, D. (2013). Predictive uncertainty of groundwater recharge rates caused by climate model chain variability and model simplification. Journal of Hydrology.
   
Möck, C., Brunner, P., Prasuhn, V., & Hunkeler, D. (2013). Evaluating the effect of climate change on groundwater recharge for different crop types. Journal of Hydrology, in preparation.
   
Jeannottat, S., & Hunkeler, D. (2013). Can soil gas VOCs be related to groundwater plumes based on their isotope signature?. Environmental Science and Technology, 47(21), 12115-12122.
   
Käser, D., & Hunkeler, D. (2013). Contribution of alluvial groundwater to the outflow of mountainous catchments. Journal of Hydrology.
   
Ducommun, P., Boutsiadou, X., & Hunkeler, D. (2013). Direct-push multilevel sampling system for unconsolidated aquifers. Système d'échantillonnage multiports installé par méthode de poussée directe, 21(8), 1901-1908.
   
Damgaard, I., Bjerg, P. L., Bælum, J., Scheutz, C., Hunkeler, D., Jacobsen, C. S., Tuxen, N., & Broholm, M. M. (2013). Identification of chlorinated solvents degradation zones in clay till by high resolution chemical, microbial and compound specific isotope analysis. Journal of Contaminant Hydrology, 146, 37-50.
   
Breider, F., Albers, C. N., & Hunkeler, D. (2013). Assessing the role of trichloroacetyl-containing compounds in the natural formation of chloroform using stable carbon isotopes analysis. Chemosphere, 90(2), 441-448.
   
Jeannottat, S., & Hunkeler, D. (2012). Chlorine and carbon isotopes fractionation during volatilization and diffusive transport of trichloroethene in the unsaturated zone. Environmental Science and Technology, 46(6), 3169-3176.
   
Jiménez-Martínez, J., Tamoh, K., Candela, L., Elorza, F. J., & Hunkeler, D. (2012). Multiphase Transport of Tritium in Unsaturated Porous Media-Bare and Vegetated Soils. Mathematical Geosciences, 44(2), 187-208.
   
Hunkeler, D., Laier, T., Breider, F., & Jacobsen, O. S. (2012). Demonstrating a natural origin of chloroform in groundwater using stable carbon isotopes. Environmental Science and Technology, 46(11), 6096-6101.
   
Elsner, M., Jochmann, M. A., Hofstetter, T. B., Hunkeler, D., Bernstein, A., Schmidt, T. C., & Schimmelmann, A. (2012). Current challenges in compound-specific stable isotope analysis of environmental organic contaminants. Analytical and Bioanalytical Chemistry, 403(9), 2471-2491.
   
Bertrand, G., Goldscheider, N., Gobat, J. M., & Hunkeler, D. (2012). Review: From multi-scale conceptualization to a classification system for inland groundwater-dependent ecosystems. Hydrogeology Journal, 20(1), 5-25.
   
Bertrand, G., Masini, J., Goldscheider, N., Meeks, J., Lavastre, V., Celle-Jeanton, H., Gobat, J. M., & Hunkeler, D. (2012). Determination of spatiotemporal variability of tree water uptake using stable isotopes (? 18O, ? 2H) in an alluvial system supplied by a high-altitude watershed, Pfyn forest, Switzerland. Ecohydrology.
   
Savoy, L., Surbeck, H., & Hunkeler, D. (2011). Radon and CO2 as natural tracers to investigate the recharge dynamics of karst aquifers. Journal of Hydrology, 406(3-4), 148-157.
   
Smits, T. H. M., Assal, A., Hunkeler, D., & Holliger, C. (2011). Anaerobic degradation of vinyl chloride in aquifer microcosms. Journal of Environmental Quality, 40(3), 915-922.
   
Morasch, B., Hunkeler, D., Zopfi, J., Temime, B., & Höhener, P. (2011). Intrinsic biodegradation potential of aromatic hydrocarbons in an alluvial aquifer - Potentials and limits of signature metabolite analysis and two stable isotope-based techniques. Water Research, 45(15), 4459-4469.
   
Perrin, J., Ahmed, S., & Hunkeler, D. (2011). The effects of geological heterogeneities and piezometric fluctuations on groundwater flow and chemistry in a hard-rock aquifer, southern India. Hydrogeology Journal, 19(6), 1189-1201.
   
Hunkeler, D., Aravena, R., Shouakar-Stash, O., Weisbrod, N., Nasser, A., Netzer, L., & Ronen, D. (2011). Carbon and chlorine isotope ratios of chlorinated ethenes migrating through a thick unsaturated zone of a sandy aquifer. Environmental Science and Technology, 45(19), 8247-8253.
   
Hunkeler, D., Abe, Y., Broholm, M. M., Jeannottat, S., Westergaard, C., Jacobsen, C. S., Aravena, R., & Bjerg, P. L. (2011). Assessing chlorinated ethene degradation in a large scale contaminant plume by dual carbon-chlorine isotope analysis and quantitative PCR. Journal of Contaminant Hydrology, 119(1-4), 69-79.
   
Courbet, C., Rivière, A., Jeannottat, S., Rinaldi, S., Hunkeler, D., Bendjoudi, H., & De Marsily, G. (2011). Complementing approaches to demonstrate chlorinated solvent biodegradation in a complex pollution plume: Mass balance, PCR and compound-specific stable isotope analysis. Journal of Contaminant Hydrology, 126(3-4), 315-329.
   
Breider, F., & Hunkeler, D. (2011). Position-specific carbon isotope analysis of trichloroacetic acid by gas chromatography/isotope ratio mass spectrometry. Rapid Communications in Mass Spectrometry, 25(24), 3659-3665.
   
Bouchard, D., Cornaton, F., Höhener, P., & Hunkeler, D. (2011). Analytical modelling of stable isotope fractionation of volatile organic compounds in the unsaturated zone. Journal of Contaminant Hydrology, 119(1-4), 44-54.
   
Bernstein, A., Shouakar-Stash, O., Ebert, K., Laskov, C., Hunkeler, D., Jeannottat, S., Sakaguchi-Söder, K., Laaks, J., Jochmann, M. A., Cretnik, S., Jager, J., Haderlein, S. B., Schmidt, T. C., Aravena, R., & Elsner, M. (2011). Compound-specific chlorine isotope analysis: A comparison of gas chromatography/isotope ratio mass spectrometry and gas chromatography/quadrupole mass spectrometry methods in an interlaboratory study. Analytical Chemistry, 83(20), 7624-7634.
   
Zhou, Y., Wang, Y., Hunkeler, D., Zwahlen, F., & Boillat, J. (2010). Differential transport of atrazine and glyphosate in undisturbed sandy soil column. Soil and Sediment Contamination, 19(3), 365-377.
   
Hunkeler, D., Höhener, P., & Atteia, O. (2010). Comments on "analytical modelling of fringe and core biodegradation in groundwater plumes." by Gutierrez-Neri et al. in J. Contam. Hydrol. 107: 1-9. Journal of Contaminant Hydrology, 117(1-4), 1-6.
   
Baillieux, A., Hunkeler, D., Perrochet, P., & ZImmermann, S. (2010). Evolution de la qualité des eaux souterraines captées. GWA, 12, 1083-1094.
   
Hunkeler, D., Van Breukelen, B. M., & Elsner, M. (2009). Modeling chlorine isotope trends during sequential transformation of chlorinated ethenes. Environmental Science and Technology, 43(17), 6750-6756.
   
Blum, P., Hunkeler, D., Weede, M., Beyer, C., Grathwohl, P., & Morasch, B. (2009). Quantification of biodegradation for o-xylene and naphthalene using first order decay models, Michaelis-Menten kinetics and stable carbon isotopes. Journal of Contaminant Hydrology, 105(3-4), 118-130.
   
Batlle-Aguilar, J., Brouyère, S., Dassargues, A., Morasch, B., Hunkeler, D., Höhener, P., Diels, L., Vanbroekhoven, K., Seuntjens, P., & Halen, H. (2009). Benzene dispersion and natural attenuation in an alluvial aquifer with strong interactions with surface water. Journal of Hydrology, 369(3-4), 305-317.
   
Abe, Y., Aravena, R., Zopfi, J., Parker, B., & Hunkeler, D. (2009). Evaluating the fate of chlorinated ethenes in streambed sediments by combining stable isotope, geochemical and microbial methods. Journal of Contaminant Hydrology, 107(1-2), 10-21.
   
Abe, Y., Aravena, R., Zopfi, J., Shouakar-Stash, O., Cox, E., Roberts, J. D., & Hunkeler, D. (2009). Carbon and chlorine isotope fractionation during aerobic oxidation and reductive dechlorination of vinyl chloride and cis-1, 2-dichloroethene. Environmental Science and Technology, 43(1), 101-107.
   
Abe, Y., Zopfi, J., & Hunkeler, D. (2009). Effect of molecule size on carbon isotope fractionation during biodegradation of chlorinated alkanes by Xanthobacter autotrophicus GJ10. Isotopes in Environmental and Health Studies, 45(1), 18-26.
   
Elsner, M., & Hunkeler, D. (2008). Evaluating chlorine isotope effects from isotope ratios and mass spectra of polychlorinated molecules. Analytical Chemistry, 80(12), 4731-4740.
   
Bouchard, D., Hunkeler, D., & Höhener, P. (2008). Carbon isotope fractionation during aerobic biodegradation of n-alkanes and aromatic compounds in unsaturated sand. Organic Geochemistry, 39(1), 23-33.
   
Bouchard, D., Höhener, P., & Hunkeler, D. (2008). Carbon isotope fractionation during volatilization of petroleum hydrocarbons and diffusion across a porous medium: A column experiment. Environmental Science and Technology, 42(21), 7801-7806.
   
Bouchard, D., Hunkeler, D., Gaganis, P., Aravena, R., Höhener, P., Broholm, M. M., & Kieldsen, P. (2008). Carbon isotope fractionation during diffusion and biodegradation of petroleum hydrocarbons in the unsaturated zone: Field experiment at Værløse Airbase, Denmark, and modeling. Environmental Science and Technology, 42(2), 596-601.
   
Chapman, S. W., Parker, B. L., Cherry, J. A., Aravena, R., & Hunkeler, D. (2007). Groundwater-surface water interaction and its role on TCE groundwater plume attenuation. Journal of Contaminant Hydrology, 91(3-4), 203-232.
   
Barth, J., Steidle, D., Kuntz, D., Gocht, T., Mouvet, C., von Tumpling, W., Lobe, I., Langenhoff, A., Albrechtsen, H. J., Janniche, G. S., Morasch, B., Hunkeler, D., & Grathwohl, P. (2007). Deposition, persistence and turnover of pollutants: First results from the EU project AquaTerra for selected river basins and aquifers. Science of the Total Environment, 376(1-3), 40-50.
   
Morasch, B., Höhener, P., & Hunkeler, D. (2007). Evidence for in situ degradation of mono-and polyaromatic hydrocarbons in alluvial sediments based on microcosm experiments with 13C-labeled contaminants. Environmental Pollution, 148(3), 739-748.
   
Abe, Y., & Hunkeler, D. (2006). Does the Rayleigh equation apply to evaluate field isotope data in contaminant hydrogeology?. Environmental Science and Technology, 40(5), 1588-1596.
   
Goldscheider, N., Hunkeler, D., & Rossi, P. (2006). Review: Microbial biocenoses in pristine aquifers and an assessment of investigative methods. Hydrogeology Journal, 14(6), 926-941.
   
Van Breukelen, B. M., Hunkeler, D., & Volkering, F. (2005). Quantification of sequential chlorinated ethene degradation by use of a reactive transport model incorporating isotope fractionation. Environmental Science and Technology, 39(11), 4189-4197.
   
Hunkeler, D., Aravena, R., Berry-Spark, K., & Cox, E. (2005). Assessment of degradation pathways in an aquifer with mixed chlorinated hydrocarbon contamination using stable isotope analysis. Environmental Science and Technology, 39(16), 5975-5981.
   
Elsner, M., Zwank, L., Hunkeler, D., & Schwarzenbach, R. P. (2005). A new concept linking observable stable isotope fractionation to transformation pathways of organic pollutants. Environmental Science and Technology, 39(18), 6896-6916.
   
Flynn, R. M., Rossi, P., & Hunkeler, D. (2004). Investigation of virus attenuation mechanisms in a fluvioglacial sand using column experiments. FEMS Microbiology Ecology, 49(1), 83-95.
   
Hunkeler, D., Chollet, N., Pittet, X., Aravena, R., Cherry, J., & Parker, B. (2004). Effect of source variability and transport processes on carbon isotope ratios of TCE and PCE in two sandy aquifers. Journal of Contaminant Hydrology, 74(1-4), 265-282.
   
Flynn, R., Cornaton, F., Hunkeler, D., & Rossi, P. (2004). Bacteriophage transport through a fining-upwards sedimentary sequence: laboratory experiments and simulation. Journal of Contaminant Hydrology, 74(1-4), 231-252.
   
Flynn, R., Cornaton, F., Hunkeler, D., & Rossi, P. (2004). Virus Transport in a Fining-Upwards Sedimentary Sequence: Laboratory Experiments and Simulation. Journal of Contaminant Hydrology, 74, 231-252.
   
Flynn, R., Hunkeler, D., Guerin, C., Burn, C., Rossi, P., & Aragno, M. (2004). Geochemical influences on H40/1 bacteriophage inactivation in glaciofluvial sands. Environmental Geology, 45(4), 504-517.
   
Hunkeler, D., Aravena, R., Parker, B., Cherry, J., & Diao, X. (2003). Monitoring oxidation of chlorinated ethenes by permanganate in groundwater using stable isotopes: Laboratory and field studies. Environmental Science & Technology, 37(4), 798-804.
   
Kirtland, B., Aelion, M., Stone, P., & Hunkeler, D. (2003). Isotopic and geochemical assessment of in situ biodegradation of chlorinated hydrocarbons. Environmental Science & Technology, 37(18), 4205-4212.
   
Hunkeler, D., Höhener, P., & Zeyer, J. (2002). Engineered and subsequent intrinsic in situ bioremediation of a diesel fuel contaminated aquifer. Journal of Contaminant Hydrology, 59(3-4), 231-245.
   
Hunkeler, D., Meckenstock, R., & Richnow, H. H. (2002). Quantification of isotope fractionation in experiments with deuterium-labeled substrate [2] (multiple letters). Applied and Environmental Microbiology, 68(10), 5205-5207.
   
Hunkeler, D., Butler, B. J., Aravena, R., & Barker, J. F. (2002). Stable isotope ratios as a tool to assess biodegradation of methyl tert-butyl ether (MTBE) and tert-butyl alcohol (TBA). IAHS-AISH Publication(275), 283-286.
   
Hunkeler, D., Aravena, R., & Cox, E. (2002). Carbon isotopes as a tool to evaluate the origin and fate of vinyl chloride: Laboratory experiments and modeling of isotope evolution. Environmental Science & Technology, 36(15), 3378-3384.
   
Hunkeler, D. (2002). Quantification of isotope fractionation in experiments with deuterium-labeled substrate. Applied and Environmental Microbiology, 68(10), 5205-5206.
   
Hunkeler, D., Butler, B., Aravena, R., & Barker, J. (2001). Monitoring biodegradation of methyl tert-butyl ether (MTBE) using compound-specific carbon isotope analysis. Environ. Sci. Technol, 35(4), 676-681.
   
Hunkeler, D., Andersen, N., Aravena, R., Bernasconi, S., & Butler, B. (2001). Hydrogen and Carbon isotope fractionation during aerobic biodegradation of benzene. Environmental Science & Technology, 35, 3462-3467.
   
Hunkeler, D., & Aravena, R. (2000). Evidence of substantial carbon isotope fractionation among substrate, inorganic carbon, and biomass during aerobic mineralization of 1,2-dichloroethane by Xanthobacter autotrophicus. Applied and Environmental Microbiology, 66(11), 4870-4876.
   
Hunkeler, D., & Aravena, R. (2000). Determination of compound-specific carbon isotope ratios of chlorinated methanes, ethanes, and ethenes in aqueous samples. Environmental Science and Technology, 34(13), 2839-2844.
   
Bloom, Y., Aravena, R., Hunkeler, D., Edwards, E., & Frape, S. K. (2000). Carbon isotope fractionation during microbial dechlorination of trichloroethene, cis-l,2-dichloroethene, and vinyl chloride: Implications for assessment of natural attenuation. Environmental Science and Technology, 34(13), 2768-2772.
   
Hunkeler, D., Höhener, P., Bernasconi, S., & Zeyer, J. (1999). Engineered in situ bioremediation of a petroleum hydrocarbon-contaminated aquifer: Assessment of mineralization based on alkalinity, inorganic carbon and stable carbon isotope balances. Journal of Contaminant Hydrology, 37(3-4), 201-223.
   
Hunkeler, D., Aravena, R., & Butler, B. J. (1999). Monitoring microbial dechlorination of tetrachloroethene (PCE) in groundwater using compound-specific stable carbon isotope ratios: Microcosm and field studies. Environmental Science and Technology, 33(16), 2733-2738.
   
Bolliger, C., Höhener, P., Hunkeler, D., Häberli, K., & Zeyer, J. (1999). Intrinsic bioremediation of a petroleum hydrocarbon-contaminated aquifer and assessment of mineralization based on stable carbon isotopes. Biodegradation, 10(3), 201-217.
   
Hunkeler, D., Jörger, D., Häberli, K., Höhener, P., & Zeyer, J. (1998). Petroleum hydrocarbon mineralization in anaerobic laboratory aquifer columns. Journal of Contaminant Hydrology, 32(1-2), 41-61.
   
Höhener, P., Hunkeler, D., Hess, A., Bregnard, T., & Zeyer, J. (1998). Methodology for the evaluation of engineered in situ bioremediation: Lessons from a case study. Journal of Microbiological Methods, 32(2), 179-192.
   
Hunkeler, D., Hoehn, E., Höhener, P., & Zeyer, J. (1997). 222Rn as a partitioning tracer to detect diesel fuel contamination in aquifers: Laboratory study and field observations. Environmental Science and Technology, 31(11), 3180-3187.
   
Hess, A., Höhener, P., Hunkeler, D., & Zeyer, J. (1996). Bioremediation of a diesel fuel contaminated aquifer: Simulation studies in laboratory aquifer columns. Journal of Contaminant Hydrology, 23(4), 329-345.
   
Hunkeler, D., Hohener, P., Haner, A., Bregnard, T., & Zeyer, J. (1995). Quantification of hydrocarbon mineralization in a diesel fuel contaminated aquifer treated by in situ biorestoration. Groundwater quality: remediation and protection. Proc. conference, Prague, 1995, 421-430.
   
Actes de congrès
Kropf, P., Schiller, E., Schilling, O., Hunkeler, D., & Lapin, A. (2014, 22 April). Wireless Mesh Networks and Cloud Computing for Real Time Environmental Simulations. Paper presented at 10th International Conference on Computing and Information Technology, IC2IT 2014,.
   
Flynn, R., Rossi, P., & Hunkeler, D. (2002). Investigation of virus attenuation mechanisms in a fluvioglacial sand using column experiments. Paper presented at 5th International Symposium on Subsurface Microbiology, Copenhagen, DENMARK.
   
 
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*Format bibliographique : APA5